FN890-S Chr1 11768578 11768578 0 0 Insertion 2 FN890-S Chr1 12628498 A-G 0 0 Single Base Substitution 0 INTRON HET FN890-S Chr1 15189599 15189600 0 0 Deletion 1 FN890-S Chr1 23365426 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g41290 OsFBD5 - F-box and FBD domain containing protein, expressed FN890-S Chr1 2549378 2549378 0 0 Insertion 22 FN890-S Chr1 3770057 G-A 0 0 Single Base Substitution 0 INTRON HET FN890-S Chr1 42541231 42541232 0 0 Deletion 1 FN890-S Chr10 1247230 1247231 0 0 Deletion 1 FN890-S Chr10 19469395 19469396 0 0 Deletion 1 FN890-S Chr10 2768327 2768330 0 0 Deletion 3 FN890-S Chr11 15096452 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr11 21391082 21391083 0 0 Deletion 1 FN890-S Chr11 27125596 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr11 3129575 Chr6 18189891 0 Translocation 0 FN890-S Chr12 17201164 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr12 3467635 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr12 9714669 C-T 0 0 Single Base Substitution 0 INTRON HET FN890-S Chr2 12561955 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr2 15814672 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os02g26920 retrotransposon protein, putative, unclassified, expressed FN890-S Chr2 15897344 15897345 0 0 Deletion 1 FN890-S Chr2 22518356 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr2 4213014 4213029 0 0 Deletion 15 FN890-S Chr3 15238101 Chr2 3401782 0 Translocation 0 FN890-S Chr3 16976442 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr3 20999224 22440077 0 0 Inversion 1440853 FN890-S Chr3 22345216 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr3 30520271 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN890-S Chr3 5702790 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN890-S Chr3 5702791 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN890-S Chr3 7066601 7066621 0 0 Deletion 20 LOC_Os03g13070 thaumatin family domain containing protein, expressed FN890-S Chr3 9251383 9251389 0 0 Deletion 6 FN890-S Chr3 9715336 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr4 10002909 10002921 0 0 Deletion 12 FN890-S Chr4 10313341 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN890-S Chr4 13602641 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN890-S Chr4 15308842 15308842 0 0 Insertion 1 FN890-S Chr4 20071155 Chr2 32911389 0 Translocation 0 LOC_Os02g53740 XI-I, putative, expressed FN890-S Chr4 20084957 Chr2 32911139 0 Translocation 0 LOC_Os02g53740 XI-I, putative, expressed FN890-S Chr4 20084957 Chr2 32911139 0 Translocation 0 LOC_Os04g33200 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed FN890-S Chr4 22661385 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g38070 retrotransposon protein, putative, unclassified, expressed FN890-S Chr4 28005823 28005826 0 0 Deletion 3 FN890-S Chr4 34102259 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g57260 expressed protein FN890-S Chr4 34819995 G-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN890-S Chr5 10088001 10132000 0 0 Deletion 44000 LOC_Os05g17560 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 10088001 10132000 0 0 Deletion 44000 LOC_Os05g17570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 10088001 10132000 0 0 Deletion 44000 LOC_Os05g17580 retrotransposon protein, putative, unclassified FN890-S Chr5 10088001 10132000 0 0 Deletion 44000 LOC_Os05g17590 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 10088001 10132000 0 0 Deletion 44000 LOC_Os05g17604 SHR5-receptor-like kinase, putative, expressed FN890-S Chr5 19962905 20041656 0 0 Inversion 78751 LOC_Os05g33840 transketolase, putative, expressed FN890-S Chr5 20039894 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr5 20042001 20097000 0 0 Deletion 55000 LOC_Os05g33960 peptide transporter PTR2, putative, expressed FN890-S Chr5 20042001 20097000 0 0 Deletion 55000 LOC_Os05g33970 hypothetical protein FN890-S Chr5 20042001 20097000 0 0 Deletion 55000 LOC_Os05g33980 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 20042001 20097000 0 0 Deletion 55000 LOC_Os05g33990 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 20042001 20097000 0 0 Deletion 55000 LOC_Os05g34000 POT family protein, expressed FN890-S Chr5 20042001 20097000 0 0 Deletion 55000 LOC_Os05g34010 peptide transporter PTR2, putative, expressed FN890-S Chr5 20042001 20097000 0 0 Deletion 55000 LOC_Os05g34020 expressed protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16800 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16810 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16824 SHR5-receptor-like kinase, putative, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16840 hypothetical protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16860 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16880 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16889 expressed protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16900 expressed protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16920 SHR5-receptor-like kinase, putative, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16930 protein kinase domain containing protein, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16940 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16950 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16970 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16980 terpene synthase 8, putative, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g16990 hypothetical protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17010 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17020 expressed protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17040 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17060 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17070 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17080 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17090 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17110 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17170 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17180 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17190 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17200 transposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17210 expressed protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17220 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17230 conserved hypothetical protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17240 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17250 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17280 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17290 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17300 expressed protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17310 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17330 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17340 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17350 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17380 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17390 expressed protein FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17400 retrotransposon, putative, centromere-specific FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17440 transposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17450 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17460 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17490 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17500 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17510 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17520 retrotransposon protein, putative, Ty3-gypsy subclass FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17530 retrotransposon protein, putative, unclassified FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17540 retrotransposon protein, putative, unclassified, expressed FN890-S Chr5 9563001 10086000 0 0 Deletion 523000 LOC_Os05g17550 retrotransposon protein, putative, unclassified, expressed FN890-S Chr6 15366161 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr6 21312102 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr6 2265183 2265192 0 0 Deletion 9 FN890-S Chr6 23360705 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr6 23360724 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr6 26384584 26384588 0 0 Deletion 4 FN890-S Chr6 28198265 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr6 7155815 7155816 0 0 Deletion 1 FN890-S Chr7 12403222 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr7 8372990 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr8 11585700 T-A 0 0 Single Base Substitution 0 INTRON HET FN890-S Chr8 14240717 14240721 0 0 Deletion 4 FN890-S Chr8 22847353 23166335 0 0 Inversion 318982 FN890-S Chr8 23802984 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN890-S Chr8 2724706 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr8 2724710 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr8 5626732 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN890-S Chr8 5681750 T-G 0 0 Single Base Substitution 0 INTRON HET FN890-S Chr9 12634740 12634740 0 0 Insertion 1