FN896-S Chr1 11533038 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr1 5051610 5051610 0 0 Insertion 3 FN896-S Chr1 7242821 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr10 1051847 1051849 0 0 Deletion 2 FN896-S Chr10 1986586 1986593 0 0 Deletion 7 FN896-S Chr10 31612 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g01020 retrotransposon protein, putative, unclassified, expressed FN896-S Chr10 63279 63279 0 0 Insertion 4 FN896-S Chr10 7373025 7373031 0 0 Deletion 6 FN896-S Chr10 9178665 9178677 0 0 Deletion 12 FN896-S Chr11 19039861 19039861 0 0 Insertion 2 FN896-S Chr11 21265001 C-T 0 0 Single Base Substitution 0 INTRON HET FN896-S Chr11 25023109 25023110 0 0 Deletion 1 LOC_Os11g41680 cytochrome P450, putative, expressed FN896-S Chr11 27289140 27289150 0 0 Deletion 10 FN896-S Chr11 28862757 28862757 0 0 Insertion 3 FN896-S Chr12 733860 733875 0 0 Deletion 15 LOC_Os12g02310 LTPL11 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN896-S Chr2 10666698 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr3 10892362 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN896-S Chr3 1567623 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr3 16801296 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr3 18225500 18746686 0 0 Inversion 521186 FN896-S Chr3 24869843 26203467 0 0 Inversion 1333624 LOC_Os03g46330 pattern formation protein EMB30, putative, expressed FN896-S Chr3 26203315 26203466 0 0 Deletion 151 LOC_Os03g46330 pattern formation protein EMB30, putative, expressed FN896-S Chr3 31840598 31840599 0 0 Deletion 1 LOC_Os03g55920 hydrolase, acting on carbon-nitrogen, putative, expressed FN896-S Chr3 34280711 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr3 9847972 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g17700 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN896-S Chr4 13048270 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g22990 retrotransposon protein, putative, unclassified, expressed FN896-S Chr4 20199582 20199593 0 0 Deletion 11 FN896-S Chr4 20897190 20897208 0 0 Deletion 18 FN896-S Chr4 30851457 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr4 5711000 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr4 7338124 7338172 0 0 Deletion 48 FN896-S Chr5 19855530 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr5 19879457 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN896-S Chr5 2135001 2158000 0 0 Deletion 23000 LOC_Os05g04584 transferase family protein, putative, expressed FN896-S Chr5 26962059 27024530 0 0 Inversion 62471 FN896-S Chr5 27189105 C-T 0 0 Single Base Substitution 0 INTRON HET FN896-S Chr6 10115620 10115630 0 0 Deletion 10 FN896-S Chr6 18014981 18015001 0 0 Deletion 20 FN896-S Chr6 25784108 25784111 0 0 Deletion 3 FN896-S Chr6 26752986 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g44310 tetraspanin family protein, putative, expressed FN896-S Chr6 27116801 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g44860 OsSPL10 - SBP-box gene family member, expressed FN896-S Chr6 2715102 2715105 0 0 Deletion 3 LOC_Os06g05930 expressed protein FN896-S Chr6 5309501 5309502 0 0 Deletion 1 FN896-S Chr7 10033835 A-G 0 0 Single Base Substitution 0 INTRON HET FN896-S Chr7 10227161 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr7 11677682 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr7 2514236 2514237 0 0 Deletion 1 FN896-S Chr7 28618241 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr7 7040362 Chr1 23343913 0 Translocation 0 LOC_Os01g41240 hydrolase, alpha/beta fold family domain containing protein, expressed FN896-S Chr7 784474 784483 0 0 Deletion 9 FN896-S Chr8 14101329 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26409 hypothetical protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26420 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26430 transposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26440 transposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26450 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26460 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26470 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26480 transposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26490 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26500 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26510 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26520 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26530 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26544 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26560 dirigent, putative FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26580 hypothetical protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26590 hypothetical protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26610 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26620 hypothetical protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26630 hypothetical protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26650 retrotransposon, putative, centromere-specific, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26660 retrotransposon, putative, centromere-specific, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26670 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26680 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26685 glycerol 3-phosphate permease, putative FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26690 retrotransposon protein, putative, Ty1-copia subclass FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26700 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26710 plant protein of unknown function domain containing protein, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26720 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26730 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26750 retrotransposon protein, putative, Ty3-gypsy subclass FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26760 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26770 retrotransposon protein, putative, unclassified FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26780 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26790 retrotransposon protein, putative, unclassified, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26800 retrotransposon protein, putative, Ty3-gypsy subclass FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26810 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26820 plant protein of unknown function domain containing protein, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26830 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26840 plant protein of unknown function domain containing protein, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26850 plant protein of unknown function domain containing protein, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26860 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26870 wound responsive protein, putative, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26875 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26880 bZIP transcription factor domain containing protein, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26890 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26900 retrotransposon protein, putative, Ty3-gypsy subclass FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26930 transposon protein, putative, CACTA, En/Spm sub-class FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26940 expressed protein FN896-S Chr8 16087001 16459000 0 0 Deletion 372000 LOC_Os08g26950 expressed protein FN896-S Chr8 695702 695702 0 0 Insertion 1 FN896-S Chr9 11028009 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g18010 expressed protein FN896-S Chr9 11391007 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN896-S Chr9 11391008 A-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g18594 protein kinase domain containing protein, expressed FN896-S Chr9 14828064 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr9 2211028 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr9 2211030 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN896-S Chr9 6855224 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN896-S Chr9 7231483 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN896-S Chr9 8035322 8035323 0 0 Deletion 1 FN896-S Chr9 8974425 C-T 0 0 Single Base Substitution 0 INTERGENIC HET