FN898-S Chr1 11959154 11959155 0 0 Deletion 1 FN898-S Chr1 12282912 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN898-S Chr1 12460733 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g22170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN898-S Chr1 14355091 C-T 0 0 Single Base Substitution 0 INTRON HET FN898-S Chr1 1639612 1639614 0 0 Deletion 2 FN898-S Chr1 22690109 22690114 0 0 Deletion 5 FN898-S Chr1 23784782 23784783 0 0 Deletion 1 LOC_Os01g41950 expressed protein FN898-S Chr1 30699680 30699682 0 0 Deletion 2 FN898-S Chr1 32718221 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN898-S Chr1 37563712 37563712 0 0 Insertion 11 LOC_Os01g64740 expressed protein FN898-S Chr1 5246166 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN898-S Chr1 7770980 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr10 13144096 13144107 0 0 Deletion 11 FN898-S Chr10 13676898 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g26370 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN898-S Chr10 15889817 T-C 0 0 Single Base Substitution 0 INTRON HET FN898-S Chr10 2716109 2716109 0 0 Insertion 1 LOC_Os10g05500 OsFBX370 - F-box domain containing protein, expressed FN898-S Chr10 5918763 G-C 0 0 Single Base Substitution 0 INTRON HET FN898-S Chr10 6881485 6881486 0 0 Deletion 1 FN898-S Chr10 9658080 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g18970 retrotransposon protein, putative, unclassified FN898-S Chr11 11061550 Chr3 1075536 0 Translocation 0 LOC_Os11g19300 transposon protein, putative, Mutator sub-class, expressed FN898-S Chr11 1720052 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g04220 HEAT repeat family protein, putative, expressed FN898-S Chr11 3823784 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr11 4118323 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr12 10520425 10521866 0 0 Deletion 1441 FN898-S Chr12 10520428 Chr2 31459033 0 Translocation 0 FN898-S Chr12 10521859 Chr2 31459030 0 Translocation 0 FN898-S Chr12 10528057 A-G 0 0 Single Base Substitution 0 INTRON HET FN898-S Chr12 13967426 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr12 14410128 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr12 14534439 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr12 1631173 5303659 0 0 Inversion 3672486 LOC_Os12g03940 expressed protein FN898-S Chr12 17105480 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g28930 retrotransposon protein, putative, unclassified FN898-S Chr12 21056852 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr12 22833967 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr12 27343170 Chr2 9346939 0 Translocation 0 LOC_Os02g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN898-S Chr12 27343170 Chr2 9346939 0 Translocation 0 LOC_Os12g44090 leucine-rich repeat family protein, putative, expressed FN898-S Chr12 7813592 7813592 0 0 Insertion 2 FN898-S Chr12 9796668 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr2 14862684 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr2 15330398 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr2 20212545 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN898-S Chr2 22849063 22849091 0 0 Deletion 28 FN898-S Chr2 23864287 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN898-S Chr2 24140450 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN898-S Chr2 24231075 24231078 0 0 Deletion 3 FN898-S Chr2 24530524 24530527 0 0 Deletion 3 LOC_Os02g40454 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed FN898-S Chr2 24964446 24964446 0 0 Insertion 1 FN898-S Chr2 26177599 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr2 31866531 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr2 6986757 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g13140 xaa-Pro dipeptidase, putative, expressed FN898-S Chr2 738778 738779 0 0 Deletion 1 FN898-S Chr2 8320929 8320949 0 0 Deletion 20 FN898-S Chr2 9609337 9609343 0 0 Deletion 6 FN898-S Chr2 9802665 10134416 0 0 Inversion 331751 LOC_Os02g17610 expressed protein FN898-S Chr2 9807001 9821000 0 0 Deletion 14000 LOC_Os02g17120 transposon protein, putative, unclassified FN898-S Chr2 9807001 9821000 0 0 Deletion 14000 LOC_Os02g17130 hypothetical protein FN898-S Chr2 9807001 9821000 0 0 Deletion 14000 LOC_Os02g17140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN898-S Chr2 9820981 10134418 0 0 Inversion 313437 LOC_Os02g17140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN898-S Chr2 9820981 10134418 0 0 Inversion 313437 LOC_Os02g17610 expressed protein FN898-S Chr3 11222118 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr3 18090024 18090028 0 0 Deletion 4 LOC_Os03g31690 GCN5-related N-acetyltransferase, putative, expressed FN898-S Chr3 21892001 21905000 0 0 Deletion 13000 LOC_Os03g39400 retrotransposon protein, putative, Ty1-copia subclass, expressed FN898-S Chr3 21892001 21905000 0 0 Deletion 13000 LOC_Os03g39407 expressed protein FN898-S Chr3 21892209 21953772 0 0 Inversion 61563 FN898-S Chr3 21953775 22842933 0 0 Inversion 889158 FN898-S Chr3 21954168 22593068 0 0 Inversion 638900 FN898-S Chr3 21954181 22951094 0 0 Inversion 996913 FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40630 transposon protein, putative, unclassified FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40650 bromodomain associated family protein, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40670 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40690 PPR repeat containing protein, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40700 presenilin, putative, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40710 ZOS3-13 - C2H2 zinc finger protein, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40720 UDP-glucose 6-dehydrogenase, putative, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40725 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40770 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40780 transport protein-related, putative, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40790 hypothetical protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40800 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40820 retrotransposon protein, putative, unclassified, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40830 OsSub30 - Putative Subtilisin homologue, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40840 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40860 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40880 retrotransposon protein, putative, unclassified, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40900 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40910 retrotransposon protein, putative, unclassified, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40920 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40930 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40950 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40960 retrotransposon protein, putative, unclassified FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40970 retrotransposon protein, putative, unclassified, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g40980 retrotransposon protein, putative, Ty3-gypsy subclass FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41000 retrotransposon protein, putative, Ty1-copia subclass, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41010 hypothetical protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41030 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41050 expressed protein FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41060 GASR2 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41064 natural resistance-associated macrophage protein, putative, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41070 metal transporter Nramp2, putative, expressed FN898-S Chr3 22593001 22843000 0 0 Deletion 250000 LOC_Os03g41080 seed maturation protein PM23, putative, expressed FN898-S Chr3 24841757 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN898-S Chr3 27962051 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr3 32861172 32861186 0 0 Deletion 14 LOC_Os03g57660 peptidase, putative, expressed FN898-S Chr3 34959910 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr3 6927370 6927371 0 0 Deletion 1 FN898-S Chr3 6959011 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g12910 squalene monooxygenase, putative, expressed FN898-S Chr3 878269 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr4 11551033 Chr2 17320491 0 Translocation 0 FN898-S Chr4 14960064 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr4 22842724 22842724 0 0 Insertion 1 FN898-S Chr4 2364828 23954040 0 0 Inversion 21589212 FN898-S Chr5 11871481 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr5 14835515 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr5 16696519 16696521 0 0 Deletion 2 FN898-S Chr5 22776086 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN898-S Chr5 27972000 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr5 5925229 5925236 0 0 Deletion 7 FN898-S Chr5 669213 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr5 8328527 8328538 0 0 Deletion 11 FN898-S Chr6 19982219 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr6 26679273 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr6 3999411 3999411 0 0 Insertion 2 FN898-S Chr7 11489776 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g19420 retrotransposon protein, putative, unclassified, expressed FN898-S Chr7 19284956 19284973 0 0 Deletion 17 FN898-S Chr7 19497935 A-C 0 0 Single Base Substitution 0 INTRON HET FN898-S Chr7 23613032 Chr2 15416730 0 Translocation 0 LOC_Os02g26240 retrotransposon protein, putative, unclassified, expressed FN898-S Chr7 23613032 Chr2 15416730 0 Translocation 0 LOC_Os07g39420 retrotransposon protein, putative, unclassified, expressed FN898-S Chr7 29029105 29029128 0 0 Deletion 23 LOC_Os07g48520 gamete-specific hydroxyproline-rich glycoprotein a2, putative, expressed FN898-S Chr7 6088138 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr7 6982782 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN898-S Chr7 9676641 9676642 0 0 Deletion 1 LOC_Os07g16510 retrotransposon, putative, centromere-specific, expressed FN898-S Chr8 12459874 Chr1 37661607 0 Translocation 0 LOC_Os08g20740 expressed protein FN898-S Chr8 20358169 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN898-S Chr8 22701182 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN898-S Chr8 25004788 25005183 0 0 Deletion 395 FN898-S Chr8 25005170 Chr6 12783800 0 Translocation 0 FN898-S Chr8 25234857 25234857 0 0 Insertion 4 FN898-S Chr9 10810246 10810248 0 0 Deletion 2 LOC_Os09g17680 NAD kinase, putative, expressed FN898-S Chr9 13061771 13061771 0 0 Insertion 2 FN898-S Chr9 19907909 Chr3 34805508 0 Translocation 0 LOC_Os03g61290 ATCHX, putative, expressed FN898-S Chr9 19907909 Chr3 34805508 0 Translocation 0 LOC_Os09g33700 expressed protein FN898-S Chr9 22911698 22911699 0 0 Deletion 1 LOC_Os09g39960 dynamin family protein, putative, expressed FN898-S Chr9 2726496 2726518 0 0 Deletion 22