FN908-S Chr1 19190199 19190203 0 0 Deletion 4 FN908-S Chr1 19202459 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr1 22801554 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr1 23371282 23371282 0 0 Insertion 2 FN908-S Chr1 24058572 24099211 0 0 Inversion 40639 FN908-S Chr1 40468997 40468997 0 0 Insertion 3 FN908-S Chr10 18951419 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr10 19468480 20071150 0 0 Inversion 602670 LOC_Os10g37490 DNA excision repair protein ERCC-1, putative, expressed FN908-S Chr10 22923335 22923351 0 0 Deletion 16 LOC_Os10g42500 PAP fibrillin family domain containing protein, expressed FN908-S Chr10 4967143 4967158 0 0 Deletion 15 FN908-S Chr10 5499340 5499349 0 0 Deletion 9 FN908-S Chr10 5619500 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed FN908-S Chr11 12785857 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g22300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr11 14288030 14288034 0 0 Deletion 4 FN908-S Chr11 14778496 Chr8 985320 0 Translocation 0 LOC_Os08g02460 expressed protein FN908-S Chr11 15882963 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN908-S Chr11 18925736 18925747 0 0 Deletion 11 FN908-S Chr11 21424198 Chr6 14556949 0 Translocation 0 LOC_Os06g24790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr11 21424198 Chr6 14556949 0 Translocation 0 LOC_Os11g36360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr11 28794547 28794547 0 0 Insertion 8 LOC_Os11g47730 expressed protein FN908-S Chr11 7087730 7087730 0 0 Insertion 2 FN908-S Chr11 7098218 Chr4 13318315 0 Translocation 0 FN908-S Chr11 986533 Chr1 19784968 0 Translocation 0 LOC_Os01g35720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr11 986533 Chr1 19784968 0 Translocation 0 LOC_Os11g02890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr11 9910985 9910992 0 0 Deletion 7 FN908-S Chr12 10034894 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17880 armadillo/beta-catenin repeat protein-related, putative, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17890 expressed protein FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17900 armadillo/beta-catenin repeat family protein, putative, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17910 T-complex protein, putative, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17920 hypothetical protein FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17930 expressed protein FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17940 expressed protein FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17950 expressed protein FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17960 expressed protein FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17970 retrotransposon protein, putative, Ty3-gypsy subclass FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g17990 retrotransposon protein, putative, Ty3-gypsy subclass FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g18000 hypothetical protein FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g18010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g18020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g18030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr12 10217001 10377000 0 0 Deletion 160000 LOC_Os12g18040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr12 11691558 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN908-S Chr12 16719731 Chr6 13458685 0 Translocation 0 FN908-S Chr12 24242495 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN908-S Chr12 8827318 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr12 8929046 8929050 0 0 Deletion 4 FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18580 retrotransposon protein, putative, unclassified, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18600 retrotransposon protein, putative, unclassified, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18610 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18612 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18614 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18620 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18630 OsFBX44 - F-box domain containing protein, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18640 OsFBX45 - F-box domain containing protein, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18650 pectinesterase, putative, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18660 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18670 ABC transporter family protein, putative, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18690 BURP domain containing protein, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18700 ABC transporter family protein, putative, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18710 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18720 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18730 retrotransposon protein, putative, LINE subclass, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18740 retrotransposon protein, putative, unclassified, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18750 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18760 retrotransposon protein, putative, unclassified, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18770 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18780 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18784 expressed protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18790 hypothetical protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18800 hypothetical protein FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18810 pentatricopeptide, putative, expressed FN908-S Chr2 10834001 10985000 0 0 Deletion 151000 LOC_Os02g18820 WD domain, G-beta repeat domain containing protein, expressed FN908-S Chr2 10985484 25468763 0 0 Inversion 14483279 LOC_Os02g18820 WD domain, G-beta repeat domain containing protein, expressed FN908-S Chr2 10985484 25468763 0 0 Inversion 14483279 LOC_Os02g42350 nitrilase, putative, expressed FN908-S Chr2 10985651 25468758 0 0 Inversion 14483107 LOC_Os02g18820 WD domain, G-beta repeat domain containing protein, expressed FN908-S Chr2 10985651 25468758 0 0 Inversion 14483107 LOC_Os02g42350 nitrilase, putative, expressed FN908-S Chr2 1297544 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g03240 transposon protein, putative, unclassified, expressed FN908-S Chr2 18069617 18069665 0 0 Deletion 48 LOC_Os02g30330 expressed protein FN908-S Chr2 20087982 20087989 0 0 Deletion 7 FN908-S Chr2 2561566 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr2 3405171 C-T 0 0 Single Base Substitution 0 INTRON HET FN908-S Chr2 34443828 34443840 0 0 Deletion 12 LOC_Os02g56280 zinc finger family protein, putative, expressed FN908-S Chr2 35471122 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN908-S Chr2 5763180 C-A 0 0 Single Base Substitution 0 INTRON HET FN908-S Chr2 6007229 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr3 12923666 12923671 0 0 Deletion 5 FN908-S Chr3 19872591 Chr2 13897067 0 Translocation 0 LOC_Os02g23970 retrotransposon, putative, centromere-specific, expressed FN908-S Chr3 25933139 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr3 3312217 3312217 0 0 Insertion 1 FN908-S Chr3 9863238 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN908-S Chr4 12689404 12689404 0 0 Insertion 4 FN908-S Chr4 15193075 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr4 22597775 22597787 0 0 Deletion 12 FN908-S Chr4 27408801 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr4 29263934 29263940 0 0 Deletion 6 FN908-S Chr5 12333641 12333651 0 0 Deletion 10 FN908-S Chr5 21094726 21094733 0 0 Deletion 7 FN908-S Chr5 22894813 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr5 27798790 27798791 0 0 Deletion 1 FN908-S Chr5 28034317 28034317 0 0 Insertion 1 FN908-S Chr5 6372663 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN908-S Chr5 8899875 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr5 8964248 8964248 0 0 Insertion 1 FN908-S Chr6 15066808 A-G 0 0 Single Base Substitution 0 INTRON HET FN908-S Chr6 25510673 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr6 5122633 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN908-S Chr6 5751778 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN908-S Chr7 1065828 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr7 11126670 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr7 11319117 11319117 0 0 Insertion 2 FN908-S Chr7 11905774 Chr4 16178237 0 Translocation 0 LOC_Os04g27380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr7 12513270 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g22320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN908-S Chr7 3577596 3577596 0 0 Insertion 1 FN908-S Chr7 4969099 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr7 8255422 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr7 9189037 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g15820 expressed protein FN908-S Chr8 14271514 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g23580 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN908-S Chr8 19998614 19998614 0 0 Insertion 1 FN908-S Chr8 22283208 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN908-S Chr8 469262 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN908-S Chr9 12081052 T-C 0 0 Single Base Substitution 0 INTRON HET FN908-S Chr9 12339375 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr9 17685612 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN908-S Chr9 9725009 Chr5 15283670 0 Translocation 0 LOC_Os05g26270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed