FN933-S Chr1 1136559 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr1 19468191 19468193 0 0 Deletion 2 LOC_Os01g35170 tRNA methyltransferase, putative, expressed FN933-S Chr1 23891637 23891648 0 0 Deletion 11 FN933-S Chr1 33779982 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr1 947453 947458 0 0 Deletion 5 LOC_Os01g02740 retrotransposon protein, putative, unclassified, expressed FN933-S Chr10 11282046 11665292 0 0 Inversion 383246 LOC_Os10g21910 acetyl-CoA carboxylase, putative, expressed FN933-S Chr10 11282046 11665292 0 0 Inversion 383246 LOC_Os10g22510 MLA1, putative, expressed FN933-S Chr10 11343098 G-A 0 0 Single Base Substitution 0 INTRON HET FN933-S Chr10 12427593 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN933-S Chr10 19885022 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed FN933-S Chr10 19885023 G-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed FN933-S Chr10 19885024 G-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed FN933-S Chr10 246908 Chr4 17017370 0 Translocation 0 FN933-S Chr10 3192187 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN933-S Chr10 6494621 6494629 0 0 Deletion 8 FN933-S Chr11 2443099 2443102 0 0 Deletion 3 FN933-S Chr11 26564030 26564031 0 0 Deletion 1 FN933-S Chr11 9281570 9281576 0 0 Deletion 6 FN933-S Chr12 16584709 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g28090 expressed protein FN933-S Chr12 23759721 23759723 0 0 Deletion 2 FN933-S Chr12 25422317 25422326 0 0 Deletion 9 FN933-S Chr12 4511001 4560000 0 0 Deletion 49000 LOC_Os12g08780 flavin monooxygenase, putative, expressed FN933-S Chr12 4511001 4560000 0 0 Deletion 49000 LOC_Os12g08790 TPR domain protein, putative, expressed FN933-S Chr12 4511001 4560000 0 0 Deletion 49000 LOC_Os12g08800 las1-like family protein, putative, expressed FN933-S Chr12 4511001 4560000 0 0 Deletion 49000 LOC_Os12g08810 VTC2, putative, expressed FN933-S Chr12 4511001 4560000 0 0 Deletion 49000 LOC_Os12g08820 growth regulator related protein, putative, expressed FN933-S Chr12 4511001 4560000 0 0 Deletion 49000 LOC_Os12g08830 thylakoid lumenal 29.8 kDa protein, putative, expressed FN933-S Chr2 13341219 13341222 0 0 Deletion 3 FN933-S Chr2 31991862 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr2 5001931 5015467 0 0 Deletion 13536 LOC_Os02g09730 hypothetical protein FN933-S Chr3 1053666 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr3 176030 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr3 1873002 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr3 20072374 20072377 0 0 Deletion 3 LOC_Os03g36180 retrotransposon protein, putative, unclassified, expressed FN933-S Chr3 21033225 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN933-S Chr3 23921682 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr3 26943587 26943588 0 0 Deletion 1 LOC_Os03g47600 retrotransposon protein, putative, unclassified, expressed FN933-S Chr3 29166787 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr3 30302651 30302660 0 0 Deletion 9 FN933-S Chr3 3680866 3680866 0 0 Insertion 1 FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25820 glycosyltransferase, putative, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25830 expressed protein FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25840 OsFBX128 - F-box domain containing protein, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25860 hypothetical protein FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25870 OsMADS84 - MADS-box family gene with M-gamma type-box, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25880 retrotransposon protein, putative, unclassified, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25890 retrotransposon protein, putative, unclassified, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25900 go35 NBS-LRR, putative, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25910 hypothetical protein FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25920 OsMADS85 - MADS-box family gene with M-gamma type-box, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25930 OsMADS99 - MADS-box family gene with M-gamma type-box FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25950 retrotransposon protein, putative, unclassified, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25960 expressed protein FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25970 cytokinin-O-glucosyltransferase 2, putative, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25980 cytokinin-O-glucosyltransferase 2, putative, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g25990 tRNA methyltransferase complex GCD14 subunit, putative, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g26000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g26010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g26020 transposon protein, putative, CACTA, En/Spm sub-class FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g26030 retrotransposon protein, putative, unclassified FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g26040 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g26050 hypothetical protein FN933-S Chr4 14982001 15161000 0 0 Deletion 179000 LOC_Os04g26060 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN933-S Chr4 18395644 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr4 29828208 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g50020 heavy-metal-associated domain-containing protein, putative, expressed FN933-S Chr4 432191 432192 0 0 Deletion 1 FN933-S Chr5 10066605 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr5 10701740 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN933-S Chr5 11773857 11773857 0 0 Insertion 1 LOC_Os05g20129 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN933-S Chr5 16575508 16575516 0 0 Deletion 8 FN933-S Chr5 3792782 3792786 0 0 Deletion 4 LOC_Os05g07190 retrotransposon protein, putative, Ty1-copia subclass, expressed FN933-S Chr5 5300443 5300443 0 0 Insertion 1 FN933-S Chr5 5460197 5485517 0 0 Deletion 25320 LOC_Os05g09660 HAD superfamily phosphatase, putative, expressed FN933-S Chr5 5460197 5485517 0 0 Deletion 25320 LOC_Os05g09670 expressed protein FN933-S Chr5 5460197 5485517 0 0 Deletion 25320 LOC_Os05g09680 acid phosphatase family, putative, expressed FN933-S Chr5 5460197 5485517 0 0 Deletion 25320 LOC_Os05g09700 expressed protein FN933-S Chr5 5460197 5485517 0 0 Deletion 25320 LOC_Os05g09704 HAD superfamily phosphatase, putative, expressed FN933-S Chr5 5460197 5485517 0 0 Deletion 25320 LOC_Os05g09708 expressed protein FN933-S Chr6 20459619 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN933-S Chr6 20829766 Chr4 23733017 0 Translocation 0 LOC_Os04g39840 Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed FN933-S Chr6 20829766 Chr4 23733017 0 Translocation 0 LOC_Os06g35690 hypothetical protein FN933-S Chr6 20830350 Chr4 23733049 0 Translocation 0 LOC_Os04g39840 Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed FN933-S Chr6 28138597 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN933-S Chr7 7853027 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN933-S Chr8 1398104 1780238 0 0 Inversion 382134 FN933-S Chr8 14680723 14680724 0 0 Deletion 1 FN933-S Chr8 23297202 23297204 0 0 Deletion 2 FN933-S Chr8 24822272 24822277 0 0 Deletion 5 FN933-S Chr8 28034189 28377859 0 0 Inversion 343670 LOC_Os08g44580 retrotransposon protein, putative, unclassified, expressed FN933-S Chr8 28034189 28377859 0 0 Inversion 343670 LOC_Os08g45190 PGR5, putative, expressed FN933-S Chr8 28326528 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN933-S Chr8 388894 Chr2 5015471 0 Translocation 0 LOC_Os02g09730 hypothetical protein FN933-S Chr8 388896 Chr2 5001934 0 Translocation 0 FN933-S Chr8 6245698 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN933-S Chr9 13614496 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr9 22441522 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr9 7063039 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN933-S Chr9 9781911 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g16010 BURP domain containing protein, expressed