FN943-S Chr1 11768578 11768578 0 0 Insertion 2 FN943-S Chr1 12627072 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr1 18625044 39124989 0 0 Inversion 20499945 FN943-S Chr1 4112417 4112423 0 0 Deletion 6 FN943-S Chr1 41722177 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr10 11905849 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr10 15838413 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr10 7684033 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr11 10845900 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN943-S Chr11 10858122 11896256 0 0 Inversion 1038134 FN943-S Chr11 23712930 23712936 0 0 Deletion 6 FN943-S Chr11 26516305 26516306 0 0 Deletion 1 FN943-S Chr11 26567497 26567498 0 0 Deletion 1 FN943-S Chr11 666338 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g02320 nucleotidyltransferase, putative, expressed FN943-S Chr11 9594563 9594564 0 0 Deletion 1 FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17250 retrotransposon protein, putative, Ty3-gypsy subclass FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17260 retrotransposon protein, putative, Ty3-gypsy subclass FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17270 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17280 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17290 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17300 transposon protein, putative, unclassified, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17310 retrotransposon protein, putative, unclassified, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17320 hypothetical protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17330 stripe rust resistance protein Yr10, putative, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17340 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17350 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17360 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17380 protein kinase domain containing protein, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17390 retrotransposon protein, putative, Ty1-copia subclass, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17400 transposon protein, putative, CACTA, En/Spm sub-class FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17410 transposon protein, putative, CACTA, En/Spm sub-class FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17420 retrotransposon protein, putative, unclassified, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17430 retrotransposon protein, putative, unclassified, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17440 enoyl-CoA hydratase/isomerase family protein, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17450 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17460 retrotransposon protein, putative, unclassified, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17480 retrotransposon protein, putative, Ty1-copia subclass, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17490 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17504 retrotransposon protein, putative, Ty1-copia subclass, expressed FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17520 expressed protein FN943-S Chr11 9602754 9771779 0 0 Deletion 169025 LOC_Os11g17530 pentatricopeptide, putative, expressed FN943-S Chr12 2428570 Chr4 19650639 0 Translocation 0 LOC_Os12g05370 RING-H2 finger protein, putative, expressed FN943-S Chr12 2433785 Chr4 19650597 0 Translocation 0 LOC_Os12g05380 glycosyltransferase, putative, expressed FN943-S Chr2 20397157 20397693 0 0 Deletion 536 LOC_Os02g34100 hypothetical protein FN943-S Chr2 5455350 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN943-S Chr2 9518323 9518323 0 0 Insertion 2 FN943-S Chr3 11535559 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25080 OsFBX86 - F-box domain containing protein, expressed FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25090 expressed protein FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25100 retrotransposon protein, putative, Ty1-copia subclass, expressed FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25110 expressed protein FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25120 HSF-type DNA-binding domain containing protein, expressed FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25130 OB-fold nucleic acid binding domain containing protein, putative, expressed FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25140 peptidyl-prolyl isomerase PASTICCINO1, putative, expressed FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25150 transposon protein, putative, unclassified, expressed FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25170 retrotransposon protein, putative, unclassified FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25180 retrotransposon protein, putative, unclassified FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25190 OsFBX87 - F-box domain containing protein, expressed FN943-S Chr3 14325001 14402000 0 0 Deletion 77000 LOC_Os03g25200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25220 OsFBX88 - F-box domain containing protein, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25240 OsFBX89 - F-box domain containing protein, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25250 OsFBX90 - F-box domain containing protein, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25260 HIT zinc finger domain containing protein, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25270 pyrrolidone-carboxylate peptidase, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25280 peroxidase precursor, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25289 auxin responsive protein, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25300 peroxidase precursor, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25304 myb-like DNA-binding domain containing protein, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25310 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25314 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25320 peroxidase precursor, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25330 peroxidase precursor, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25340 peroxidase precursor, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25350 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25360 peroxidase precursor, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25364 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25370 peroxidase precursor, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25374 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25380 pentatricopeptide, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25390 novel plant SNARE 11, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25394 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25400 kinase, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25410 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25420 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25430 transcription regulator, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25434 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25440 expressed protein FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25450 h/ACA ribonucleoprotein complex subunit 4, putative, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25460 OsRCI2-4 - Putative low temperature and salt responsive protein, expressed FN943-S Chr3 14413001 14552000 0 0 Deletion 139000 LOC_Os03g25464 hypothetical protein FN943-S Chr3 17447298 17447306 0 0 Deletion 8 FN943-S Chr3 27054328 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN943-S Chr3 8102294 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g14860 G-patch domain containing protein, expressed FN943-S Chr4 10841584 C-G 0 0 Single Base Substitution 0 INTRON HET FN943-S Chr4 16567103 16567106 0 0 Deletion 3 FN943-S Chr4 18285758 18285765 0 0 Deletion 7 FN943-S Chr4 1981783 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g04240 sterol 3-beta-glucosyltransferase, putative, expressed FN943-S Chr4 19932029 19932039 0 0 Deletion 10 FN943-S Chr4 19975658 19975695 0 0 Deletion 37 FN943-S Chr4 21935306 21935319 0 0 Deletion 13 FN943-S Chr4 30808086 30808087 0 0 Deletion 1 FN943-S Chr4 34563303 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr4 469678 469685 0 0 Deletion 7 FN943-S Chr4 744942 746529 0 0 Inversion 1587 FN943-S Chr5 22332588 22332588 0 0 Insertion 2 FN943-S Chr5 27563516 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN943-S Chr5 3688746 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr5 8026659 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN943-S Chr5 8026660 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN943-S Chr6 1118471 1118472 0 0 Deletion 1 FN943-S Chr6 11393444 11393466 0 0 Deletion 22 FN943-S Chr6 21809538 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN943-S Chr6 27802818 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr6 5506896 5506905 0 0 Deletion 9 FN943-S Chr6 6459697 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr7 10483236 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr7 12897464 12897474 0 0 Deletion 10 LOC_Os07g22880 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN943-S Chr7 18867605 18867606 0 0 Deletion 1 FN943-S Chr7 18930255 C-T 0 0 Single Base Substitution 0 INTRON HET FN943-S Chr7 5804369 5804370 0 0 Deletion 1 FN943-S Chr7 6894587 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr7 8619785 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr8 11545794 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr8 18747411 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr8 20486314 20486314 0 0 Insertion 4 FN943-S Chr8 23675644 24166898 0 0 Inversion 491254 FN943-S Chr9 10472407 10472430 0 0 Deletion 23 FN943-S Chr9 14036246 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN943-S Chr9 16395109 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN943-S Chr9 8361853 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET