FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28184 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28200 transposon protein, putative, unclassified, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28220 hypothetical protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28230 ZOS1-07 - C2H2 zinc finger protein, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28244 retrotransposon protein, putative, unclassified, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28260 hypothetical protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28270 retrotransposon protein, putative, Ty1-copia subclass FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28280 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28290 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28300 OsFBX7 - F-box domain containing protein, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28310 transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28320 retrotransposon, putative, centromere-specific FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28340 retrotransposon protein, putative, Ty3-gypsy subclass FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28350 hypothetical protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28360 retrotransposon, putative, centromere-specific, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28370 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28380 retrotransposon, putative, centromere-specific FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28390 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28400 transposon protein, putative, unclassified, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28410 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28420 transposon protein, putative, CACTA, En/Spm sub-class FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28450 SCP-like extracellular protein, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28474 transferase family protein, putative, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28490 retrotransposon protein, putative, Ty1-copia subclass, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28500 SCP-like extracellular protein, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28510 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28520 OsFBX8 - F-box domain containing protein, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28530 retrotransposon protein, putative, Ty3-gypsy subclass FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28540 stress regulated protein, putative, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28550 retrotransposon protein, putative, Ty1-copia subclass FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28560 retrotransposon protein, putative, Ty1-copia subclass FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28570 pentatricopeptide, putative, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28580 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28590 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28600 exo70 exocyst complex subunit family protein, putative, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28610 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28630 retrotransposon protein, putative, unclassified FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28640 retrotransposon protein, putative, Ty3-gypsy subclass FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28650 retrotransposon, putative, centromere-specific, expressed FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28660 expressed protein FN948-S Chr1 15797001 16042000 0 0 Deletion 245000 LOC_Os01g28670 hypothetical protein FN948-S Chr1 2551382 2551390 0 0 Deletion 8 FN948-S Chr1 29694740 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr10 12916684 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN948-S Chr10 132183 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g01200 retrotransposon protein, putative, Ty3-gypsy subclass FN948-S Chr10 14633002 14633003 0 0 Deletion 1 LOC_Os10g28180 hAT dimerisation domain containing protein, expressed FN948-S Chr10 15926951 Chr2 31158566 0 Translocation 0 FN948-S Chr10 15927291 Chr2 31158565 0 Translocation 0 FN948-S Chr10 170555 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g01260 retrotransposon protein, putative, unclassified, expressed FN948-S Chr10 18422439 A-G 0 0 Single Base Substitution 0 INTRON HET FN948-S Chr10 2583392 3529328 0 0 Inversion 945936 FN948-S Chr10 2961883 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g05870 retrotransposon protein, putative, unclassified FN948-S Chr10 2961885 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN948-S Chr10 3018370 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN948-S Chr11 11011495 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr11 15792451 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr11 15952487 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35550 Leucine Rich Repeat family protein, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35570 retrotransposon protein, putative, unclassified, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35580 disease resistance protein RPM1, putative, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35590 retrotransposon protein, putative, unclassified, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35600 expressed protein FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35610 hypothetical protein FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35620 expressed protein FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35630 retrotransposon protein, putative, unclassified, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35660 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35670 expressed protein FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35690 retrotransposon protein, putative, unclassified, expressed FN948-S Chr11 20839001 20936000 0 0 Deletion 97000 LOC_Os11g35700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN948-S Chr11 5388829 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr12 15016180 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr12 23908839 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN948-S Chr2 20133460 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr2 32187645 32187645 0 0 Insertion 1 FN948-S Chr2 8994245 8994246 0 0 Deletion 1 LOC_Os02g15890 hypothetical protein FN948-S Chr3 16372739 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g28420 3-oxoacyl-synthase, putative, expressed FN948-S Chr3 3881802 3881802 0 0 Insertion 2 FN948-S Chr4 11662523 11662523 0 0 Insertion 4 FN948-S Chr4 24954339 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr5 10087598 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr5 19677775 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN948-S Chr5 7213358 7213370 0 0 Deletion 12 LOC_Os05g12570 NB-ARC domain containing protein, expressed FN948-S Chr5 8734258 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr5 9505843 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN948-S Chr5 9505844 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN948-S Chr6 10649153 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr6 20448017 20448018 0 0 Deletion 1 FN948-S Chr6 20615428 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN948-S Chr6 29557513 29557516 0 0 Deletion 3 FN948-S Chr7 11160311 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr7 20400207 20400216 0 0 Deletion 9 FN948-S Chr7 3355253 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN948-S Chr7 6460535 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g11680 retrotransposon protein, putative, unclassified, expressed FN948-S Chr8 11113102 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g18120 retrotransposon protein, putative, Ty3-gypsy subclass FN948-S Chr8 12007088 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN948-S Chr8 2309999 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN948-S Chr9 18500028 A-T 0 0 Single Base Substitution 0 INTRON HET FN948-S Chr9 18500029 C-T 0 0 Single Base Substitution 0 INTRON HET FN948-S Chr9 8309739 8309743 0 0 Deletion 4