FN955-S Chr1 10098199 10098202 0 0 Deletion 3 FN955-S Chr1 14567120 14567126 0 0 Deletion 6 FN955-S Chr1 14632859 14632859 0 0 Insertion 4 FN955-S Chr1 17721288 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN955-S Chr1 24898726 24898731 0 0 Deletion 5 FN955-S Chr1 27316439 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN955-S Chr1 36347592 36347593 0 0 Deletion 1 LOC_Os01g62770 expressed protein FN955-S Chr1 3947511 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr1 40789897 T-A 0 0 Single Base Substitution 0 INTRON HET FN955-S Chr1 41027212 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr10 10006203 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN955-S Chr10 22367937 22367945 0 0 Deletion 8 FN955-S Chr10 3544149 3544158 0 0 Deletion 9 FN955-S Chr11 13259842 Chr4 10208284 0 Translocation 0 LOC_Os04g18470 retrotransposon, putative, centromere-specific, expressed FN955-S Chr11 17643001 17662000 0 0 Deletion 19000 LOC_Os11g30390 transposon protein, putative, unclassified, expressed FN955-S Chr11 17643535 18979933 0 0 Inversion 1336398 FN955-S Chr11 26623013 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr11 2851931 2851932 0 0 Deletion 1 FN955-S Chr11 3129575 Chr6 18189892 0 Translocation 0 FN955-S Chr12 17452361 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr12 22949880 24195206 0 0 Inversion 1245326 LOC_Os12g37380 RNA pseudouridine synthase, putative, expressed FN955-S Chr12 22949880 24195206 0 0 Inversion 1245326 LOC_Os12g39320 DUF221 domain containing protein, expressed FN955-S Chr12 3756811 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g07540 growth regulator related protein, putative, expressed FN955-S Chr2 12854366 12855402 0 0 Deletion 1036 FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22450 expressed protein FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22480 glycosyltransferase, putative, expressed FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22490 retrotransposon protein, putative, Ty3-gypsy subclass FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22510 retrotransposon protein, putative, Ty3-gypsy subclass FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22530 retrotransposon protein, putative, Ty3-gypsy subclass FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22540 retrotransposon protein, putative, unclassified FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22550 retrotransposon protein, putative, unclassified, expressed FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22560 retrotransposon protein, putative, unclassified FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22570 retrotransposon protein, putative, unclassified, expressed FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22580 expressed protein FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22590 expressed protein FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22600 retrotransposon protein, putative, unclassified, expressed FN955-S Chr2 13408728 13484721 0 0 Deletion 75993 LOC_Os02g22610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN955-S Chr2 13408740 14727717 0 0 Inversion 1318977 FN955-S Chr2 14727714 15206418 0 0 Inversion 478704 LOC_Os02g25910 histone H3, putative, expressed FN955-S Chr2 14750482 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN955-S Chr2 14750483 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN955-S Chr2 18063988 18063995 0 0 Deletion 7 FN955-S Chr2 19400561 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr2 3983349 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr3 33859075 33859076 0 0 Deletion 1 FN955-S Chr3 3930185 3930186 0 0 Deletion 1 FN955-S Chr4 11145479 T-A 0 0 Single Base Substitution 0 INTRON HET FN955-S Chr4 14868171 14868171 0 0 Insertion 1 FN955-S Chr4 32487617 32487617 0 0 Insertion 2 FN955-S Chr4 4546449 Chr2 12854381 0 Translocation 0 LOC_Os04g08450 expressed protein FN955-S Chr5 18108885 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN955-S Chr5 18125496 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN955-S Chr5 19704713 Chr3 30857701 0 Translocation 0 LOC_Os05g33550 methyl-binding domain protein MBD, putative, expressed FN955-S Chr5 19704895 Chr3 30859398 0 Translocation 0 LOC_Os05g33550 methyl-binding domain protein MBD, putative, expressed FN955-S Chr5 29058489 29058541 0 0 Deletion 52 FN955-S Chr5 3546434 Chr3 22228349 0 Translocation 0 LOC_Os05g06790 expressed protein FN955-S Chr5 5140634 19704713 0 0 Inversion 14564079 LOC_Os05g33550 methyl-binding domain protein MBD, putative, expressed FN955-S Chr5 9684657 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr6 13902426 13902426 0 0 Insertion 14 FN955-S Chr6 27198821 27198827 0 0 Deletion 6 FN955-S Chr6 2853138 2853141 0 0 Deletion 3 FN955-S Chr6 9282559 9282559 0 0 Insertion 1 FN955-S Chr7 16963928 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr7 17880641 17880659 0 0 Deletion 18 FN955-S Chr7 24313236 24313236 0 0 Insertion 2 FN955-S Chr7 28222400 28222407 0 0 Deletion 7 FN955-S Chr7 28706966 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN955-S Chr8 12951566 12984920 0 0 Inversion 33354 FN955-S Chr8 27508617 Chr2 12855389 0 Translocation 0 FN955-S Chr8 27508622 Chr2 12854731 0 Translocation 0 FN955-S Chr8 27973245 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g44480 40S ribosomal protein S25, putative, expressed FN955-S Chr8 28427156 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN955-S Chr8 3716198 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN955-S Chr8 6420119 6420120 0 0 Deletion 1 LOC_Os08g10890 retrotransposon, putative, centromere-specific, expressed FN955-S Chr8 7681507 8484377 0 0 Inversion 802870 LOC_Os08g12920 retrotransposon protein, putative, unclassified, expressed FN955-S Chr8 8409544 8409545 0 0 Deletion 1 FN955-S Chr9 15989219 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN955-S Chr9 17819352 17819357 0 0 Deletion 5 FN955-S Chr9 3969132 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN955-S Chr9 8330241 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass