FN961-S Chr1 10799846 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr1 10805795 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g19130 protein phosphatase 2C, putative, expressed FN961-S Chr1 11148749 11148755 0 0 Deletion 6 LOC_Os01g19660 retrotransposon protein, putative, unclassified, expressed FN961-S Chr1 13655503 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr1 17859116 17859117 0 0 Deletion 1 FN961-S Chr1 23445831 23445831 0 0 Insertion 2 FN961-S Chr1 26447338 26447339 0 0 Deletion 1 FN961-S Chr1 275870 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr1 29114553 C-T 0 0 Single Base Substitution 0 INTRON HET FN961-S Chr1 30237907 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr1 30237909 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr1 32133882 32133905 0 0 Deletion 23 FN961-S Chr1 6282139 G-C 0 0 Single Base Substitution 0 INTRON HET FN961-S Chr1 8699044 8699045 0 0 Deletion 1 FN961-S Chr10 14914819 14914819 0 0 Insertion 1 FN961-S Chr10 15468601 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr10 6460145 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g11690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN961-S Chr11 11091317 11091320 0 0 Deletion 3 FN961-S Chr11 11314293 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN961-S Chr11 26141370 26174683 0 0 Inversion 33313 LOC_Os11g43320 NBS-LRR type disease resistance protein, putative, expressed FN961-S Chr11 26141394 26174690 0 0 Inversion 33296 LOC_Os11g43320 NBS-LRR type disease resistance protein, putative, expressed FN961-S Chr11 26618591 26618592 0 0 Deletion 1 FN961-S Chr11 27744306 Chr9 11970466 0 Translocation 0 LOC_Os09g19990 retrotransposon protein, putative, unclassified FN961-S Chr11 27744306 Chr9 11970466 0 Translocation 0 LOC_Os11g45864 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN961-S Chr12 11667645 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN961-S Chr12 15427805 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g26400 retrotransposon protein, putative, unclassified, expressed FN961-S Chr2 26304188 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr2 5841761 5841780 0 0 Deletion 19 FN961-S Chr3 19996267 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os03g36050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN961-S Chr3 23168643 23168655 0 0 Deletion 12 LOC_Os03g41700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN961-S Chr3 25860663 G-A 0 0 Single Base Substitution 0 START_GAINED HET LOC_Os03g45779 expressed protein FN961-S Chr3 26175512 26175534 0 0 Deletion 22 FN961-S Chr3 31973448 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr3 4280653 4280663 0 0 Deletion 10 LOC_Os03g08380 ABC transporter, ATP-binding protein, putative, expressed FN961-S Chr3 8880081 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr4 10066927 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr4 10300837 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN961-S Chr4 16931935 T-G 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN961-S Chr4 23624265 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr4 28706548 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN961-S Chr4 34310159 34310161 0 0 Deletion 2 FN961-S Chr4 5032756 5032760 0 0 Deletion 4 FN961-S Chr4 5622410 C-T 0 0 Single Base Substitution 0 INTRON HET FN961-S Chr4 5979877 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr4 6736859 6736876 0 0 Deletion 17 FN961-S Chr5 14003433 14003443 0 0 Deletion 10 FN961-S Chr5 15929375 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr5 18706226 18706251 0 0 Deletion 25 FN961-S Chr5 26112024 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN961-S Chr5 5104850 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr6 10486890 10486891 0 0 Deletion 1 FN961-S Chr6 14033230 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr6 16666430 Chr1 11109755 0 Translocation 0 LOC_Os06g29200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN961-S Chr6 18096316 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os06g31150 retrotransposon protein, putative, unclassified, expressed FN961-S Chr6 21097154 21097171 0 0 Deletion 17 FN961-S Chr6 24407498 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr6 935210 935212 0 0 Deletion 2 FN961-S Chr7 10579040 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr7 19044128 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr7 19156138 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr7 23954697 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g39930 expressed protein FN961-S Chr7 23995263 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr7 25584515 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr7 25584516 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr7 27652662 27652663 0 0 Deletion 1 FN961-S Chr8 16788238 Chr3 19478448 0 Translocation 0 FN961-S Chr8 513427 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr8 6607748 6607749 0 0 Deletion 1 FN961-S Chr8 8807498 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN961-S Chr8 9188721 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr9 11786831 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr9 12523399 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN961-S Chr9 15385579 15400051 0 0 Inversion 14472 FN961-S Chr9 15386001 15397000 0 0 Deletion 11000 LOC_Os09g25620 CPuORF8 - conserved peptide uORF-containing transcript, expressed FN961-S Chr9 15386001 15397000 0 0 Deletion 11000 LOC_Os09g25625 S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed FN961-S Chr9 15386001 15397000 0 0 Deletion 11000 LOC_Os09g25630 expressed protein FN961-S Chr9 15396845 15400079 0 0 Inversion 3234 FN961-S Chr9 15481301 15481302 0 0 Deletion 1 FN961-S Chr9 4349164 4349165 0 0 Deletion 1 FN961-S Chr9 7048031 G-A 0 0 Single Base Substitution 0 INTRON HOMO