FN964-S Chr1 103733 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr1 11916468 11916471 0 0 Deletion 3 FN964-S Chr1 12927263 12927263 0 0 Insertion 1 FN964-S Chr1 13162805 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr1 28131148 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr1 31329447 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr1 35333787 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr1 40409600 40409600 0 0 Insertion 2 LOC_Os01g69920 histidine kinase, putative, expressed FN964-S Chr1 41938146 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr1 5956624 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr10 13900564 Chr4 16367931 0 Translocation 0 LOC_Os10g26630 CSLA2 - cellulose synthase-like family A; mannan synthase, expressed FN964-S Chr10 16371270 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr10 18900113 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr10 3481253 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr10 5484231 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr11 10027772 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr11 15367130 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr11 20311585 20311592 0 0 Deletion 7 FN964-S Chr12 11635800 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g19980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN964-S Chr12 9527741 Chr6 25514508 0 Translocation 0 FN964-S Chr2 13626762 13703686 0 0 Inversion 76924 FN964-S Chr2 4530850 4530852 0 0 Deletion 2 FN964-S Chr3 17850088 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr3 22531987 22531996 0 0 Deletion 9 FN964-S Chr3 28930902 28930902 0 0 Insertion 1 FN964-S Chr3 30126209 30126216 0 0 Deletion 7 FN964-S Chr3 5141936 5141937 0 0 Deletion 1 FN964-S Chr3 769673 A-C 0 0 Single Base Substitution 0 INTRON HET FN964-S Chr4 13103088 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr4 16367919 Chr2 10703139 0 Translocation 0 FN964-S Chr4 2537059 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr4 2673383 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr4 30410567 30410579 0 0 Deletion 12 LOC_Os04g51350 pentatricopeptide, putative, expressed FN964-S Chr4 4203993 4204002 0 0 Deletion 9 FN964-S Chr4 4369680 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr4 7678052 7678074 0 0 Deletion 22 FN964-S Chr4 9280449 9280452 0 0 Deletion 3 LOC_Os04g16950 retrotransposon protein, putative, unclassified, expressed FN964-S Chr5 28759446 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr5 29890753 G-A 0 0 Single Base Substitution 0 INTRON HET FN964-S Chr6 10744657 Chr4 16367931 0 Translocation 0 FN964-S Chr6 11215866 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr6 22279922 22279922 0 0 Insertion 2 FN964-S Chr6 26924576 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g44590 retrotransposon protein, putative, unclassified, expressed FN964-S Chr6 28042679 28042680 0 0 Deletion 1 FN964-S Chr6 30259618 30259622 0 0 Deletion 4 FN964-S Chr6 8819642 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr7 21276557 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr7 26945167 26945174 0 0 Deletion 7 FN964-S Chr7 28423376 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN964-S Chr8 17068520 17651544 0 0 Inversion 583024 LOC_Os08g28870 receptor-like protein kinase 5 precursor, putative, expressed FN964-S Chr8 2171944 Chr7 24487595 0 Translocation 0 FN964-S Chr8 25725801 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g40640 retrotransposon protein, putative, Ty1-copia subclass, expressed FN964-S Chr8 4726802 4726809 0 0 Deletion 7 FN964-S Chr8 4967419 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN964-S Chr8 8494713 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g14210 glycosyl hydrolases family 16, putative, expressed FN964-S Chr8 965083 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr9 11219133 11219135 0 0 Deletion 2 FN964-S Chr9 11390354 11390358 0 0 Deletion 4 FN964-S Chr9 18894591 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN964-S Chr9 2079819 T-C 0 0 Single Base Substitution 0 INTERGENIC HET