FN978-S Chr1 10567248 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr1 10567471 11325213 0 0 Inversion 757742 FN978-S Chr1 17167774 17535659 0 0 Inversion 367885 LOC_Os01g32030 retrotransposon, putative, centromere-specific FN978-S Chr1 20907223 20907233 0 0 Deletion 10 FN978-S Chr1 22256596 T-A 0 0 Single Base Substitution 0 INTRON HET FN978-S Chr1 2329880 2329880 0 0 Insertion 2 FN978-S Chr1 5007522 5007533 0 0 Deletion 11 FN978-S Chr1 5104394 5104401 0 0 Deletion 7 FN978-S Chr1 7191280 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr1 7229234 33506545 0 0 Inversion 26277311 LOC_Os01g57960 retrotransposon protein, putative, unclassified, expressed FN978-S Chr1 7375554 7804133 0 0 Inversion 428579 FN978-S Chr1 7375567 7804156 0 0 Inversion 428589 FN978-S Chr10 1691227 G-A 0 0 Single Base Substitution 0 START_GAINED HET LOC_Os10g03740 OsFBX348 - F-box domain containing protein, expressed FN978-S Chr10 1750369 1750377 0 0 Deletion 8 FN978-S Chr10 18628322 Chr5 9638214 0 Translocation 0 FN978-S Chr10 18941317 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN978-S Chr10 20185329 20185349 0 0 Deletion 20 LOC_Os10g37720 hydrolase, alpha/beta fold family protein, putative, expressed FN978-S Chr10 20185329 20185349 0 0 Deletion 20 LOC_Os10g37730 pollen ankyrin, putative, expressed FN978-S Chr11 17689817 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr11 19191736 19191739 0 0 Deletion 3 FN978-S Chr11 24262431 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr12 18211695 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr12 1898014 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN978-S Chr12 20909879 Chr6 8520812 0 Translocation 0 FN978-S Chr12 26266653 26266660 0 0 Deletion 7 FN978-S Chr12 26909980 26909980 0 0 Insertion 3 LOC_Os12g43370 peptidase, M24 family protein, putative, expressed FN978-S Chr12 277670 G-T 0 0 Single Base Substitution 0 INTRON HET FN978-S Chr12 5672519 5674643 0 0 Deletion 2124 LOC_Os12g10630 ZF-HD protein dimerisation region containing protein, expressed FN978-S Chr2 12298549 12298575 0 0 Deletion 26 FN978-S Chr2 13467141 Chr1 26060845 0 Translocation 0 LOC_Os01g45880 retrotransposon protein, putative, unclassified, expressed FN978-S Chr2 19091412 19091434 0 0 Deletion 22 LOC_Os02g32340 Spc97 / Spc98 family protein, putative, expressed FN978-S Chr2 19101526 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os02g32350 TUDOR protein with multiple SNc domains, putative, expressed FN978-S Chr2 28012238 28012238 0 0 Insertion 2 FN978-S Chr2 30652947 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g50174 caleosin related protein, putative, expressed FN978-S Chr2 30654846 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr2 31696381 C-A 0 0 Single Base Substitution 0 INTRON HET FN978-S Chr2 32227242 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr2 32513468 32513487 0 0 Deletion 19 FN978-S Chr2 33758045 33758048 0 0 Deletion 3 LOC_Os02g55110 expressed protein FN978-S Chr2 34547853 T-C 0 0 Single Base Substitution 0 INTRON HET FN978-S Chr2 4108019 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr2 7817220 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr3 16207521 16207538 0 0 Deletion 17 FN978-S Chr3 16340082 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr3 16411894 16411904 0 0 Deletion 10 FN978-S Chr3 17233482 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr3 19287231 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr3 25195037 25195038 0 0 Deletion 1 FN978-S Chr3 28924665 29073843 0 0 Inversion 149178 FN978-S Chr3 28946192 29073843 0 0 Inversion 127651 FN978-S Chr3 28946283 Chr2 21947216 0 Translocation 0 FN978-S Chr3 32364484 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr3 33349580 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN978-S Chr3 33349581 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN978-S Chr4 10220906 10220917 0 0 Deletion 11 FN978-S Chr4 22896294 Chr2 13396941 0 Translocation 0 LOC_Os04g38530 aldose 1-epimerase, putative, expressed FN978-S Chr4 2390839 2390846 0 0 Deletion 7 FN978-S Chr4 312993 312993 0 0 Insertion 2 FN978-S Chr4 32540853 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g54710 retrotransposon protein, putative, unclassified, expressed FN978-S Chr4 8979393 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr5 19978072 19978083 0 0 Deletion 11 LOC_Os05g33860 expressed protein FN978-S Chr5 2022903 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr5 23498148 23498153 0 0 Deletion 5 FN978-S Chr5 25511379 25511441 0 0 Deletion 62 FN978-S Chr5 26146170 26146173 0 0 Deletion 3 LOC_Os05g44970 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN978-S Chr5 3543877 Chr3 13563773 0 Translocation 0 FN978-S Chr6 11646889 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr6 14639836 14639836 0 0 Insertion 1 FN978-S Chr6 16172062 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr6 16172063 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr6 20411993 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr6 24615311 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr6 27955752 C-T 0 0 Single Base Substitution 0 INTRON HET FN978-S Chr6 4535826 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr6 4564810 4564815 0 0 Deletion 5 FN978-S Chr6 7477529 7477529 0 0 Insertion 1 FN978-S Chr7 10912926 10912930 0 0 Deletion 4 LOC_Os07g18450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN978-S Chr7 22588144 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr7 25751570 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr7 3740678 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr7 5951715 C-T 0 0 Single Base Substitution 0 INTRON HET FN978-S Chr7 7172121 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN978-S Chr8 12508393 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g20849 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN978-S Chr8 14907148 14907156 0 0 Deletion 8 FN978-S Chr8 20785819 21078843 0 0 Inversion 293024 LOC_Os08g33740 CSLA11 - cellulose synthase-like family A, expressed FN978-S Chr8 20785830 21078856 0 0 Inversion 293026 LOC_Os08g33740 CSLA11 - cellulose synthase-like family A, expressed FN978-S Chr9 15510050 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN978-S Chr9 15585045 15585046 0 0 Deletion 1 FN978-S Chr9 1943435 Chr6 25273419 0 Translocation 0 LOC_Os06g42070 expressed protein FN978-S Chr9 1943435 Chr6 25273419 0 Translocation 0 LOC_Os09g03830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN978-S Chr9 19593456 19593457 0 0 Deletion 1