FN993-S Chr1 14258265 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN993-S Chr1 37065656 37065660 0 0 Deletion 4 LOC_Os01g63880 expressed protein FN993-S Chr1 586220 586221 0 0 Deletion 1 LOC_Os01g02070 invertase/pectin methylesterase inhibitor family protein, putative, expressed FN993-S Chr1 6260993 6260994 0 0 Deletion 1 FN993-S Chr1 6911808 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN993-S Chr1 765930 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01200 retrotransposon protein, putative, unclassified, expressed FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01210 retrotransposon protein, putative, unclassified FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01230 transposon protein, putative, unclassified FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01240 retrotransposon protein, putative, Ty3-gypsy subclass FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01250 transposon protein, putative, unclassified, expressed FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01260 transposon protein, putative, unclassified, expressed FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01270 retrotransposon protein, putative, unclassified, expressed FN993-S Chr1 96001 136000 0 0 Deletion 40000 LOC_Os01g01280 expressed protein FN993-S Chr10 16130591 16130627 0 0 Deletion 36 LOC_Os10g30910 transmembrane protein-related, putative, expressed FN993-S Chr10 18945249 18945257 0 0 Deletion 8 FN993-S Chr10 22354769 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr10 7596002 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr10 7679476 7679480 0 0 Deletion 4 FN993-S Chr10 9413777 9413777 0 0 Insertion 2 LOC_Os10g18560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN993-S Chr11 12721077 12721086 0 0 Deletion 9 LOC_Os11g22160 retrotransposon protein, putative, unclassified, expressed FN993-S Chr11 9972230 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr12 13810825 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr12 14608446 T-G 0 0 Single Base Substitution 0 INTRON HET FN993-S Chr12 16499222 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr2 10427378 10459424 0 0 Deletion 32046 LOC_Os02g17970 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN993-S Chr2 10427378 10459424 0 0 Deletion 32046 LOC_Os02g17980 retrotransposon protein, putative, unclassified, expressed FN993-S Chr2 10427378 10459424 0 0 Deletion 32046 LOC_Os02g17990 Leucine Rich Repeat family protein, expressed FN993-S Chr2 10427378 10459424 0 0 Deletion 32046 LOC_Os02g18000 disease resistance protein RGA2, putative, expressed FN993-S Chr2 10427378 10459424 0 0 Deletion 32046 LOC_Os02g18010 hypothetical protein FN993-S Chr2 10427378 10459424 0 0 Deletion 32046 LOC_Os02g18020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN993-S Chr2 10427378 10459424 0 0 Deletion 32046 LOC_Os02g18030 retrotransposon protein, putative, Ty3-gypsy subclass FN993-S Chr2 10450692 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN993-S Chr2 10450694 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN993-S Chr2 10450697 G-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN993-S Chr2 13118418 13118421 0 0 Deletion 3 FN993-S Chr2 15118199 15122715 0 0 Deletion 4516 LOC_Os02g25800 retrotransposon protein, putative, unclassified, expressed FN993-S Chr2 15118199 15122715 0 0 Deletion 4516 LOC_Os02g25810 retrotransposon protein, putative, unclassified, expressed FN993-S Chr2 16819181 16819199 0 0 Deletion 18 FN993-S Chr2 19054746 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr2 19214790 19214790 0 0 Insertion 4 FN993-S Chr2 19427799 19427799 0 0 Insertion 6 FN993-S Chr2 27164257 27164258 0 0 Deletion 1 FN993-S Chr2 30828689 30828717 0 0 Deletion 28 FN993-S Chr2 9443849 9443850 0 0 Deletion 1 FN993-S Chr3 19239236 19239237 0 0 Deletion 1 FN993-S Chr3 20446001 20472000 0 0 Deletion 26000 LOC_Os03g36830 expressed protein FN993-S Chr3 20446001 20472000 0 0 Deletion 26000 LOC_Os03g36860 retrotransposon protein, putative, unclassified, expressed FN993-S Chr3 20446001 20472000 0 0 Deletion 26000 LOC_Os03g36870 retrotransposon protein, putative, unclassified, expressed FN993-S Chr3 20446001 20472000 0 0 Deletion 26000 LOC_Os03g36880 retrotransposon protein, putative, unclassified, expressed FN993-S Chr3 20446001 20472000 0 0 Deletion 26000 LOC_Os03g36890 retrotransposon protein, putative, unclassified, expressed FN993-S Chr3 26722960 26722960 0 0 Insertion 1 FN993-S Chr3 29547847 29547848 0 0 Deletion 1 FN993-S Chr3 30584452 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr3 34112019 34112032 0 0 Deletion 13 FN993-S Chr3 6751020 6751033 0 0 Deletion 13 FN993-S Chr4 21913001 21929000 0 0 Deletion 16000 LOC_Os04g35940 OsFBX135 - F-box domain containing protein, expressed FN993-S Chr4 21913001 21929000 0 0 Deletion 16000 LOC_Os04g35950 retrotransposon protein, putative, unclassified, expressed FN993-S Chr4 21913001 21929000 0 0 Deletion 16000 LOC_Os04g35960 retrotransposon protein, putative, unclassified, expressed FN993-S Chr4 34380460 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr4 35002583 35002595 0 0 Deletion 12 FN993-S Chr4 35076634 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr4 6133348 Chr1 41519465 0 Translocation 0 LOC_Os01g71630 expressed protein FN993-S Chr5 1045585 Chr2 10427394 0 Translocation 0 LOC_Os02g17970 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN993-S Chr5 1157148 Chr2 10458497 0 Translocation 0 LOC_Os02g18020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN993-S Chr5 1157148 Chr2 10458497 0 Translocation 0 LOC_Os05g03040 AP2 domain containing protein, expressed FN993-S Chr5 11988951 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed FN993-S Chr5 13957165 13957165 0 0 Insertion 2 FN993-S Chr5 36688 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN993-S Chr5 36691 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN993-S Chr5 9458275 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr6 12556001 12584000 0 0 Deletion 28000 LOC_Os06g21730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN993-S Chr6 12556001 12584000 0 0 Deletion 28000 LOC_Os06g21740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN993-S Chr6 12556001 12584000 0 0 Deletion 28000 LOC_Os06g21750 expressed protein FN993-S Chr6 12556001 12584000 0 0 Deletion 28000 LOC_Os06g21760 jasmonate O-methyltransferase, putative, expressed FN993-S Chr6 12556001 12584000 0 0 Deletion 28000 LOC_Os06g21770 hypothetical protein FN993-S Chr6 5675580 5675582 0 0 Deletion 2 FN993-S Chr6 6385425 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr7 17578531 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr7 21046472 Chr3 7019544 0 Translocation 0 LOC_Os07g35140 receptor-like serine-threonine protein kinase, putative, expressed FN993-S Chr7 21047823 Chr3 7019541 0 Translocation 0 LOC_Os07g35140 receptor-like serine-threonine protein kinase, putative, expressed FN993-S Chr7 26816304 C-A 0 0 Single Base Substitution 0 INTRON HET FN993-S Chr7 2742151 2742152 0 0 Deletion 1 FN993-S Chr7 29661649 29661649 0 0 Insertion 2 FN993-S Chr8 12493060 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr8 14380001 14392000 0 0 Deletion 12000 LOC_Os08g23760 retrotransposon protein, putative, unclassified, expressed FN993-S Chr8 14380001 14392000 0 0 Deletion 12000 LOC_Os08g23770 retrotransposon protein, putative, unclassified, expressed FN993-S Chr8 19048415 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN993-S Chr8 23745355 G-A 0 0 Single Base Substitution 0 INTRON HET FN993-S Chr8 9321663 9321676 0 0 Deletion 13 FN993-S Chr9 4633837 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g08780 transposon protein, putative, CACTA, En/Spm sub-class FN993-S Chr9 9676857 G-T 0 0 Single Base Substitution 0 INTERGENIC HET