FN_789-3-1 Chr1 1241089 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN_789-3-1 Chr1 1241090 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g03170 seven in absentia protein family protein, expressed FN_789-3-1 Chr1 21079068 C-A 0 0 Single Base Substitution 0 INTRON HET FN_789-3-1 Chr1 22492268 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g39870 expressed protein FN_789-3-1 Chr1 23919583 244282 0 0 Deletion 508 FN_789-3-1 Chr1 23919590 24587408 0 0 Inversion 667818 LOC_Os01g42210 LTPL47 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN_789-3-1 Chr1 23919590 24587408 0 0 Inversion 667818 LOC_Os01g43100 protein phosphatase 2C, putative, expressed FN_789-3-1 Chr1 24428233 24587409 0 0 Inversion 159176 LOC_Os01g43100 protein phosphatase 2C, putative, expressed FN_789-3-1 Chr1 24954639 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr1 27328611 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr1 27511491 27511491 0 0 Insertion 3 FN_789-3-1 Chr1 36477243 36477243 0 0 Insertion 1 FN_789-3-1 Chr1 38399479 383994 0 0 Deletion 2 FN_789-3-1 Chr1 3907913 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr1 4041249 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr1 4819500 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr1 5859975 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr10 18181877 Chr1 30351398 0 Translocation 0 FN_789-3-1 Chr10 23059383 23059385 0 0 Deletion 2 FN_789-3-1 Chr10 2518584 3794899 0 0 Inversion 1276315 LOC_Os10g05160 expressed protein FN_789-3-1 Chr10 2518584 3794899 0 0 Inversion 1276315 LOC_Os10g07229 dehydrogenase, putative, expressed FN_789-3-1 Chr10 3545836 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g06960 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g06970 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g06980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g06990 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07000 hypothetical protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07004 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07010 3-ketoacyl-CoA synthase, putative, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07030 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07040 chalcone synthase, putative, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07050 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07060 B3 DNA binding domain containing protein, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07080 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07090 retrotransposon, putative, centromere-specific FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07100 retrotransposon, putative, centromere-specific FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07110 retrotransposon, putative, centromere-specific, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07114 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07120 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07130 expressed protein FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07150 transposon protein, putative, unclassified, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07160 retrotransposon, putative, centromere-specific, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07180 retrotransposon protein, putative, LINE subclass, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07190 retrotransposon protein, putative, unclassified, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07200 hsp20/alpha crystallin family protein, putative, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07210 hsp20/alpha crystallin family protein, putative, expressed FN_789-3-1 Chr10 3628001 3795000 0 0 Deletion 167000 LOC_Os10g07229 dehydrogenase, putative, expressed FN_789-3-1 Chr10 6254288 6254288 0 0 Insertion 1 LOC_Os10g11270 sulfotransferase domain containing protein, expressed FN_789-3-1 Chr11 13169864 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr11 13169867 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr11 18280314 182803 0 0 Deletion 1 FN_789-3-1 Chr11 18328321 183283 0 0 Deletion 1 FN_789-3-1 Chr11 5179816 517981 0 0 Deletion 2 FN_789-3-1 Chr12 15173810 15173811 0 0 Deletion 1 FN_789-3-1 Chr12 17060677 170606 0 0 Deletion 1 FN_789-3-1 Chr12 21382445 21382445 0 0 Insertion 2 LOC_Os12g35140 retrotransposon protein, putative, unclassified, expressed FN_789-3-1 Chr12 6891541 6891541 0 0 Insertion 19 FN_789-3-1 Chr2 14388341 14388347 0 0 Deletion 6 LOC_Os02g24790 retrotransposon protein, putative, unclassified, expressed FN_789-3-1 Chr2 24252623 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr2 27949115 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr2 335824 335824 0 0 Insertion 1 FN_789-3-1 Chr2 35077195 35077195 0 0 Insertion 4 FN_789-3-1 Chr3 11450001 11468000 0 0 Deletion 18000 LOC_Os03g20260 aspartic proteinase nepenthesin-1 precursor, putative, expressed FN_789-3-1 Chr3 11450001 11468000 0 0 Deletion 18000 LOC_Os03g20270 aspartic proteinase nepenthesin-1 precursor, putative, expressed FN_789-3-1 Chr3 11450001 11468000 0 0 Deletion 18000 LOC_Os03g20280 retrotransposon protein, putative, unclassified, expressed FN_789-3-1 Chr3 11450001 11468000 0 0 Deletion 18000 LOC_Os03g20290 aspartic proteinase nepenthesin-1 precursor, putative, expressed FN_789-3-1 Chr3 15387908 15387908 0 0 Insertion 2 FN_789-3-1 Chr3 156134 A-G 0 0 Single Base Substitution 0 INTRON HET FN_789-3-1 Chr3 18992468 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr3 22843833 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr3 23565838 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr3 25224996 25224997 0 0 Deletion 1 FN_789-3-1 Chr3 33122697 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr3 34596713 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr4 13775792 13775792 0 0 Insertion 1 FN_789-3-1 Chr4 13777200 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr4 15537147 15537147 0 0 Insertion 1 FN_789-3-1 Chr4 19902233 19902245 0 0 Deletion 12 LOC_Os04g32940 Leucine Rich Repeat family protein, expressed FN_789-3-1 Chr4 2036058 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g04330 receptor-like protein kinase 2 precursor, putative, expressed FN_789-3-1 Chr4 2062215 2062228 0 0 Deletion 13 FN_789-3-1 Chr4 20839093 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr4 2522393 2522394 0 0 Deletion 1 LOC_Os04g05090 expressed protein FN_789-3-1 Chr4 2522704 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g05090 expressed protein FN_789-3-1 Chr4 26826213 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr4 31409347 31409353 0 0 Deletion 6 FN_789-3-1 Chr5 11992563 119925 0 0 Deletion 28 FN_789-3-1 Chr5 12105784 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr5 16209155 162091 0 0 Deletion 1 FN_789-3-1 Chr5 26814700 26814712 0 0 Deletion 12 FN_789-3-1 Chr6 15546946 C-T 0 0 Single Base Substitution 0 INTRON HET FN_789-3-1 Chr6 18197714 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr6 21693487 21693487 0 0 Insertion 67 FN_789-3-1 Chr6 24601172 24601172 0 0 Insertion 1 FN_789-3-1 Chr6 25172664 251726 0 0 Deletion 4 FN_789-3-1 Chr6 25447842 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr6 29159055 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN_789-3-1 Chr7 10608673 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr7 12180952 12180952 0 0 Insertion 1 FN_789-3-1 Chr7 17292747 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr7 17476746 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g29730 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN_789-3-1 Chr7 23288564 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN_789-3-1 Chr7 25972434 25972434 0 0 Insertion 1 FN_789-3-1 Chr7 6381060 6381060 0 0 Insertion 6 FN_789-3-1 Chr7 9993642 9993642 0 0 Insertion 1 FN_789-3-1 Chr8 18004340 18004340 0 0 Insertion 29 FN_789-3-1 Chr8 18553397 185634 0 0 Deletion 100 FN_789-3-1 Chr8 18553674 185637 0 0 Deletion 100 FN_789-3-1 Chr8 25652221 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN_789-3-1 Chr9 16213969 16213981 0 0 Deletion 12 LOC_Os09g26690 transposon protein, putative, unclassified, expressed FN_789-3-1 Chr9 16981174 16981174 0 0 Insertion 1 LOC_Os09g27950 galactosyltransferase, putative, expressed FN_789-3-1 Chr9 22219245 Chr3 29724777 0 Translocation 0 LOC_Os03g51830 heat shock protein DnaJ, putative, expressed FN_789-3-1 Chr9 22219513 Chr3 29724473 0 Translocation 0 LOC_Os03g51830 heat shock protein DnaJ, putative, expressed FN_789-3-1 Chr9 5023505 T-A 0 0 Single Base Substitution 0 INTRON Homo FN_789-3-1 Chr9 5748993 5748994 0 0 Deletion 1 LOC_Os09g10540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN_789-3-1 Chr9 726781 726782 0 0 Deletion 1 FN_789-3-1 Chr9 8090920 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo