W246-5-1 Chr1 12644998 14455138 0 0 Inversion 1810140 W246-5-1 Chr1 12645016 14455150 0 0 Inversion 1810134 W246-5-1 Chr1 14047336 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr1 17317570 G-A 0 0 Single Base Substitution 0 INTRON HOMO W246-5-1 Chr1 2005649 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr1 21079068 C-A 0 0 Single Base Substitution 0 INTRON HOMO W246-5-1 Chr1 23860439 A-T 0 0 Single Base Substitution 0 INTRON HOMO W246-5-1 Chr1 23860440 G-T 0 0 Single Base Substitution 0 INTRON HOMO W246-5-1 Chr1 42329617 42765390 0 0 Inversion 435773 LOC_Os01g72980 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed W246-5-1 Chr1 42334784 42653577 0 0 Inversion 318793 LOC_Os01g72980 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed W246-5-1 Chr1 42334784 42653577 0 0 Inversion 318793 LOC_Os01g73620 expressed protein W246-5-1 Chr1 42589895 42609501 0 0 Deletion 19606 LOC_Os01g73500 expressed protein W246-5-1 Chr1 42589895 42609501 0 0 Deletion 19606 LOC_Os01g73514 5-oxoprolinase, putative, expressed W246-5-1 Chr1 42589895 42609501 0 0 Deletion 19606 LOC_Os01g73530 ABC transporter, ATP-binding protein, putative, expressed W246-5-1 Chr10 10063918 10063919 0 0 Deletion 1 W246-5-1 Chr10 10505626 10505645 0 0 Deletion 19 W246-5-1 Chr10 17832498 17832516 0 0 Deletion 18 W246-5-1 Chr11 10823954 11165736 0 0 Inversion 341782 LOC_Os11g19420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed W246-5-1 Chr11 10883642 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr11 18168616 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr11 21677895 21677896 0 0 Deletion 1 W246-5-1 Chr11 24810994 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr12 14093911 Chr4 14630935 0 Translocation 0 W246-5-1 Chr12 14830482 15153459 0 0 Inversion 322977 LOC_Os12g25630 sulfite oxidase, putative, expressed W246-5-1 Chr12 14830482 15153459 0 0 Inversion 322977 LOC_Os12g26080 transposon protein, putative, CACTA, En/Spm sub-class, expressed W246-5-1 Chr12 14830484 Chr6 5579610 0 Translocation 0 LOC_Os06g10690 PHD-finger domain containing protein, putative, expressed W246-5-1 Chr12 14830484 Chr6 5579610 0 Translocation 0 LOC_Os12g25630 sulfite oxidase, putative, expressed W246-5-1 Chr12 15153473 16034554 0 0 Inversion 881081 LOC_Os12g26080 transposon protein, putative, CACTA, En/Spm sub-class, expressed W246-5-1 Chr12 15510465 16034553 0 0 Inversion 524088 LOC_Os12g26540 retrotransposon protein, putative, Ty1-copia subclass, expressed W246-5-1 Chr12 15510483 Chr1 42589896 0 Translocation 0 LOC_Os01g73500 expressed protein W246-5-1 Chr12 15510483 Chr1 42589896 0 Translocation 0 LOC_Os12g26540 retrotransposon protein, putative, Ty1-copia subclass, expressed W246-5-1 Chr12 15884700 15884714 0 0 Deletion 14 W246-5-1 Chr12 15992327 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr12 16073253 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr12 16073255 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr12 16073258 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr12 1675560 2648766 0 0 Inversion 973206 LOC_Os12g05740 expressed protein W246-5-1 Chr12 17015720 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g28780 expressed protein W246-5-1 Chr12 18829846 18829859 0 0 Deletion 13 W246-5-1 Chr12 24429674 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g39590 retrotransposon protein, putative, unclassified, expressed W246-5-1 Chr12 2880214 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr12 3152475 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr12 3494172 3494172 0 0 Insertion 1 W246-5-1 Chr12 5376117 C-T 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr2 1252284 G-C 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr2 30693973 C-T 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr2 34717979 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr3 12491713 12491714 0 0 Deletion 1 W246-5-1 Chr3 13638670 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr3 13638671 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr3 26478962 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr3 28717930 Chr2 6171088 0 Translocation 0 W246-5-1 Chr3 6500508 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr4 11374740 11374742 0 0 Deletion 2 W246-5-1 Chr4 19690674 19690674 0 0 Insertion 2 LOC_Os04g32670 exostosin family domain containing protein, expressed W246-5-1 Chr4 20178665 A-G 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr4 22633583 G-T 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr4 30769606 Chr1 42653573 0 Translocation 0 LOC_Os01g73620 expressed protein W246-5-1 Chr4 30769606 Chr1 42653573 0 Translocation 0 LOC_Os04g51880 GHMP kinases ATP-binding protein, putative, expressed W246-5-1 Chr4 30769685 Chr1 42652598 0 Translocation 0 LOC_Os01g73620 expressed protein W246-5-1 Chr4 30769685 Chr1 42652598 0 Translocation 0 LOC_Os04g51880 GHMP kinases ATP-binding protein, putative, expressed W246-5-1 Chr4 31409347 31409353 0 0 Deletion 6 W246-5-1 Chr4 61485 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET W246-5-1 Chr5 1511906 T-A 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr5 15561191 15561192 0 0 Deletion 1 W246-5-1 Chr5 17829070 17829071 0 0 Deletion 1 W246-5-1 Chr5 380313 C-T 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr5 5576495 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g10250 retrotransposon protein, putative, unclassified, expressed W246-5-1 Chr5 6402287 6402287 0 0 Insertion 4 W246-5-1 Chr5 8312171 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr6 16641432 16641443 0 0 Deletion 11 W246-5-1 Chr6 20016654 20016655 0 0 Deletion 1 W246-5-1 Chr6 20388678 20388679 0 0 Deletion 1 W246-5-1 Chr6 21217147 21217162 0 0 Deletion 15 LOC_Os06g36220 OsFBX198 - F-box domain containing protein, expressed W246-5-1 Chr6 29159055 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr6 5584937 Chr1 42590421 0 Translocation 0 W246-5-1 Chr6 7932742 7932742 0 0 Insertion 1 W246-5-1 Chr7 10608673 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr7 23080855 23080855 0 0 Insertion 1 W246-5-1 Chr8 15928429 16353204 0 0 Inversion 424775 W246-5-1 Chr8 17195809 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET W246-5-1 Chr8 18494296 18494296 0 0 Insertion 1 W246-5-1 Chr8 22135557 Chr1 1232743 0 Translocation 0 LOC_Os01g03160 xylosyltransferase, putative, expressed W246-5-1 Chr8 22647001 22659000 0 0 Deletion 12000 LOC_Os08g35910 expressed protein W246-5-1 Chr8 22647001 22659000 0 0 Deletion 12000 LOC_Os08g35920 transposon protein, putative, Pong sub-class, expressed W246-5-1 Chr8 22647001 22659000 0 0 Deletion 12000 LOC_Os08g35930 OsFBL50 - F-box domain and LRR containing protein, expressed W246-5-1 Chr8 23329668 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr8 27323581 T-A 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr8 27323582 C-A 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr8 27323583 T-A 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr8 27501005 27501022 0 0 Deletion 17 LOC_Os08g43470 ER lumen protein retaining receptor, putative, expressed W246-5-1 Chr8 58436 62929 0 0 Deletion 4493 LOC_Os08g01080 expressed protein W246-5-1 Chr8 592233 592238 0 0 Deletion 5 W246-5-1 Chr8 9309255 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g15310 transposon protein, putative, CACTA, En/Spm sub-class, expressed W246-5-1 Chr9 1688445 1688447 0 0 Deletion 2 LOC_Os09g03420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed W246-5-1 Chr9 21419153 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO W246-5-1 Chr9 22395327 T-A 0 0 Single Base Substitution 0 INTERGENIC HET W246-5-1 Chr9 3000114 3000115 0 0 Deletion 1 W246-5-1 Chr9 6029287 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO