W577-3-1 Chr1 19154982 19154991 0 0 Deletion 9 W577-3-1 Chr1 21109752 21109752 0 0 Insertion 1 W577-3-1 Chr1 21736103 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g38700 nucleic acid binding protein, putative, expressed W577-3-1 Chr1 25601689 25601691 0 0 Deletion 2 W577-3-1 Chr1 26809177 26809178 0 0 Deletion 1 W577-3-1 Chr10 1322137 1329892 0 0 Deletion 7755 LOC_Os10g03130 retrotransposon protein, putative, unclassified, expressed W577-3-1 Chr10 1322137 1329892 0 0 Deletion 7755 LOC_Os10g03140 retrotransposon protein, putative, unclassified, expressed W577-3-1 Chr10 1322143 Chr4 15303738 0 Translocation 0 LOC_Os10g03130 retrotransposon protein, putative, unclassified, expressed W577-3-1 Chr10 17241297 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO W577-3-1 Chr11 11641437 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed W577-3-1 Chr11 14614126 14614127 0 0 Deletion 1 W577-3-1 Chr11 21188575 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO W577-3-1 Chr11 22721757 22721758 0 0 Deletion 1 W577-3-1 Chr11 23751434 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO W577-3-1 Chr11 26640715 26640717 0 0 Deletion 2 W577-3-1 Chr12 4652104 G-T 0 0 Single Base Substitution 0 INTERGENIC HET W577-3-1 Chr12 9159271 9159276 0 0 Deletion 5 W577-3-1 Chr2 13163158 G-T 0 0 Single Base Substitution 0 INTRON HET W577-3-1 Chr2 17705915 C-T 0 0 Single Base Substitution 0 INTRON HET W577-3-1 Chr2 19638197 19638197 0 0 Insertion 1 W577-3-1 Chr2 24120906 24120906 0 0 Insertion 2 W577-3-1 Chr2 33749244 33750159 0 0 Deletion 915 W577-3-1 Chr2 5578661 5578662 0 0 Deletion 1 W577-3-1 Chr2 5810643 5810644 0 0 Deletion 1 W577-3-1 Chr2 5835953 5835954 0 0 Deletion 1 W577-3-1 Chr3 3312217 3312217 0 0 Insertion 1 W577-3-1 Chr3 4377274 4377282 0 0 Deletion 8 W577-3-1 Chr4 1088631 1088632 0 0 Deletion 1 W577-3-1 Chr4 12148012 12148013 0 0 Deletion 1 LOC_Os04g21480 retrotransposon protein, putative, unclassified, expressed W577-3-1 Chr4 17429948 17429949 0 0 Deletion 1 W577-3-1 Chr4 20326665 20326665 0 0 Insertion 1 W577-3-1 Chr4 34660574 34660582 0 0 Deletion 8 W577-3-1 Chr4 3561243 G-A 0 0 Single Base Substitution 0 INTRON HET W577-3-1 Chr4 3561244 C-A 0 0 Single Base Substitution 0 INTRON HET W577-3-1 Chr4 3561245 A-T 0 0 Single Base Substitution 0 INTRON HET W577-3-1 Chr4 8537220 G-A 0 0 Single Base Substitution 0 INTERGENIC HET W577-3-1 Chr5 23115413 23115420 0 0 Deletion 7 W577-3-1 Chr5 23274260 23274261 0 0 Deletion 1 W577-3-1 Chr5 29074293 29074294 0 0 Deletion 1 W577-3-1 Chr5 4499291 4499298 0 0 Deletion 7 W577-3-1 Chr5 6422048 7027702 0 0 Inversion 605654 LOC_Os05g11370 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11840 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11850 glycosyl hydrolase family 47 domain contain protein, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11860 zinc finger, C3HC4 type domain containing protein, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11870 hydrolase, NUDIX family, domain containing protein, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11890 retrotransposon protein, putative, Ty3-gypsy subclass W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11900 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11910 GDSL-like lipase/acylhydrolase, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11920 hypothetical protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11930 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11940 retrotransposon protein, putative, Ty1-copia subclass, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11950 GDSL-like lipase/acylhydrolase, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11960 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11970 GDSL-like lipase/acylhydrolase, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11980 timeless protein, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g11990 TTL1, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12000 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12010 hypothetical protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12020 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12030 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12040 cytochrome P450 51, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12050 retrotransposon protein, putative, unclassified W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12060 retrotransposon protein, putative, unclassified, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12070 retrotransposon protein, putative, unclassified, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12080 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12090 VQ domain containing protein, putative W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12094 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12100 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12110 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12120 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12130 EMB2261, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12140 Leucine Rich Repeat family protein, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12150 endoglucanase precursor, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12160 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12170 plant-specific domain TIGR01589 family protein, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12180 chalcone synthase, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12190 chalcone synthase, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12200 transposon protein, putative, CACTA, En/Spm sub-class W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12210 chalcone synthase, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12220 hypothetical protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12230 expressed protein W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12240 chalcone synthase, putative, expressed W577-3-1 Chr5 6746001 7028000 0 0 Deletion 282000 LOC_Os05g12250 hypothetical protein W577-3-1 Chr6 14302889 14302897 0 0 Deletion 8 W577-3-1 Chr6 15259011 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g26070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed W577-3-1 Chr6 17453940 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO W577-3-1 Chr6 18115134 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO W577-3-1 Chr6 21686060 21686061 0 0 Deletion 1 W577-3-1 Chr6 2913160 2913163 0 0 Deletion 3 W577-3-1 Chr6 30840902 30840910 0 0 Deletion 8 W577-3-1 Chr6 6667784 7007400 0 0 Inversion 339616 LOC_Os06g12820 proteins of unknown function domain containing protein, expressed W577-3-1 Chr6 6667795 7007398 0 0 Inversion 339603 LOC_Os06g12820 proteins of unknown function domain containing protein, expressed W577-3-1 Chr6 7098783 C-T 0 0 Single Base Substitution 0 INTRON HET W577-3-1 Chr7 11280632 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET W577-3-1 Chr7 12492885 A-G 0 0 Single Base Substitution 0 INTERGENIC HET W577-3-1 Chr7 20454977 G-A 0 0 Single Base Substitution 0 INTERGENIC HET W577-3-1 Chr7 2557858 2557863 0 0 Deletion 5 W577-3-1 Chr7 3742117 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO W577-3-1 Chr7 4360220 4360223 0 0 Deletion 3 W577-3-1 Chr8 19998614 19998614 0 0 Insertion 1 W577-3-1 Chr8 25258142 25258143 0 0 Deletion 1 W577-3-1 Chr8 25584484 25584492 0 0 Deletion 8 W577-3-1 Chr9 11830629 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO W577-3-1 Chr9 15966558 15966576 0 0 Deletion 18 W577-3-1 Chr9 4529868 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g08650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed