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| Mutant Information |
|---|
| Mutant Name | 702-8 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download 702-8 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 20
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr2 | 16830296 | G-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 16830297 | G-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 28243290 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 2697724 | C-T | Homo | INTERGENIC | |
| SBS | Chr3 | 11293201 | T-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 11427240 | C-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 11685194 | A-C | Hetero | INTERGENIC | |
| SBS | Chr3 | 13542616 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 14154630 | T-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 25163523 | A-T | Homo | INTERGENIC | |
| SBS | Chr3 | 25910810 | G-A | Homo | INTERGENIC | |
| SBS | Chr3 | 26981660 | A-G | Homo | INTERGENIC | |
| SBS | Chr3 | 29596339 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 3868730 | C-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 24304350 | C-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 13188230 | T-C | Hetero | INTERGENIC | |
| SBS | Chr8 | 22214115 | G-T | Hetero | INTRON | |
| SBS | Chr9 | 4142968 | T-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 7750346 | A-G | Homo | INTERGENIC | |
| SBS | Chr11 | 25479923 | C-A | Homo | INTERGENIC |
Deletions: 15
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 22561 | 22562 | 1 | |
| Deletion | Chr3 | 5118093 | 5118344 | 251 | |
| Deletion | Chr12 | 7482597 | 7482598 | 1 | |
| Deletion | Chr7 | 8683538 | 8683539 | 1 | |
| Deletion | Chr6 | 10098572 | 10098574 | 2 | OsKitaake06g116000 |
| Deletion | Chr9 | 14127347 | 14127348 | 1 | OsKitaake09g095000 |
| Deletion | Chr9 | 15001155 | 15001156 | 1 | |
| Deletion | Chr5 | 16415001 | 16442000 | 26999 | |
| Deletion | Chr3 | 16528056 | 16528058 | 2 | |
| Deletion | Chr11 | 17440742 | 17440908 | 166 | |
| Deletion | Chr8 | 20641971 | 20642062 | 91 | OsKitaake08g153600 |
| Deletion | Chr6 | 24702948 | 24702949 | 1 | |
| Deletion | Chr5 | 30167792 | 30167793 | 1 | |
| Deletion | Chr1 | 33814419 | 33814421 | 2 | OsKitaake01g347400 |
| Deletion | Chr1 | 39862188 | 39862298 | 110 |
Insertions: 2
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr4 | 23036051 | 23036053 | 1 | |
| Insertion | Chr5 | 30232136 | 30232144 | 7 |
Translocations: 1
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr10 | 19939978 | Chr3 | 10513498 | OsKitaake03g144200 |