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| Mutant Information |
|---|
| Mutant Name | 703-2 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download 703-2 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 29
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 20211110 | T-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 25185693 | G-C | Hetero | NON_SYNONYMOUS_CODING | OsKitaake01g243600 |
| SBS | Chr1 | 32221118 | C-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 36858849 | T-A | Hetero | NON_SYNONYMOUS_CODING | OsKitaake01g392400 |
| SBS | Chr1 | 39467132 | G-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 29930162 | T-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 31021725 | C-G | Hetero | UTR_3_PRIME | |
| SBS | Chr3 | 34130389 | A-G | Homo | INTERGENIC | |
| SBS | Chr4 | 11614876 | G-C | Hetero | INTERGENIC | |
| SBS | Chr4 | 21169059 | T-C | Hetero | INTERGENIC | |
| SBS | Chr5 | 8184543 | T-C | Homo | INTERGENIC | |
| SBS | Chr5 | 9661930 | C-T | Hetero | INTERGENIC | |
| SBS | Chr5 | 12179385 | G-A | Homo | INTERGENIC | |
| SBS | Chr6 | 8629246 | T-G | Hetero | INTERGENIC | |
| SBS | Chr6 | 15877272 | C-T | Homo | INTERGENIC | |
| SBS | Chr6 | 17615062 | A-G | Homo | UTR_3_PRIME | |
| SBS | Chr6 | 26759434 | G-A | Homo | INTERGENIC | |
| SBS | Chr8 | 11076419 | G-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 26710678 | G-A | Homo | INTRON | |
| SBS | Chr9 | 10998986 | C-T | Homo | UTR_3_PRIME | |
| SBS | Chr9 | 13452781 | T-C | Homo | INTERGENIC | |
| SBS | Chr9 | 14220358 | C-T | Hetero | INTERGENIC | |
| SBS | Chr9 | 14793289 | G-T | Hetero | NON_SYNONYMOUS_CODING | OsKitaake09g101200 |
| SBS | Chr10 | 5207126 | A-G | Hetero | INTERGENIC | |
| SBS | Chr10 | 16634074 | G-A | Homo | NON_SYNONYMOUS_CODING | OsKitaake10g113800 |
| SBS | Chr10 | 20157577 | A-T | Homo | INTERGENIC | |
| SBS | Chr10 | 20157578 | A-T | Homo | INTERGENIC | |
| SBS | Chr10 | 21448524 | A-T | Homo | INTERGENIC | |
| SBS | Chr12 | 11617394 | G-T | Hetero | INTERGENIC |
Deletions: 13
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr3 | 2082398 | 2082399 | 1 | |
| Deletion | Chr11 | 3760462 | 3760467 | 5 | |
| Deletion | Chr9 | 7871001 | 7931000 | 59999 | 3 |
| Deletion | Chr8 | 8204574 | 8204575 | 1 | |
| Deletion | Chr9 | 8236001 | 8266000 | 29999 | 2 |
| Deletion | Chr9 | 9753784 | 9753791 | 7 | |
| Deletion | Chr10 | 9794001 | 9845000 | 50999 | 2 |
| Deletion | Chr3 | 15900649 | 15900659 | 10 | |
| Deletion | Chr10 | 16296642 | 16296643 | 1 | OsKitaake10g109700 |
| Deletion | Chr11 | 17238560 | 17238566 | 6 | |
| Deletion | Chr2 | 20646001 | 20715000 | 68999 | 2 |
| Deletion | Chr2 | 21617571 | 21617786 | 215 | |
| Deletion | Chr5 | 29175239 | 29175244 | 5 |
Insertions: 2
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr2 | 33127569 | 33127571 | 1 | OsKitaake02g340200  |
| Insertion | Chr1 | 9692959 | 9692961 | 1 |
Inversions: 3
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr10 | 9437853 | 10255786 | |
| Inversion | Chr10 | 9624263 | 10255797 | |
| Inversion | Chr10 | 9842319 | 10229912 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr9 | 8227824 | Chr2 | 23429668 | OsKitaake02g229500 |
| Translocation | Chr9 | 8228174 | Chr2 | 23430453 |