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| Mutant Information |
|---|
| Mutant Name | 707-2 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download 707-2 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 26
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 6463902 | C-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 6638216 | C-A | Homo | SYNONYMOUS_CODING | |
| SBS | Chr1 | 29213354 | G-C | Homo | INTERGENIC | |
| SBS | Chr2 | 1559848 | C-T | Homo | INTERGENIC | |
| SBS | Chr2 | 7332182 | G-A | Homo | INTERGENIC | |
| SBS | Chr2 | 10525950 | C-T | Homo | UTR_5_PRIME | |
| SBS | Chr3 | 16415326 | A-G | Hetero | INTERGENIC | |
| SBS | Chr3 | 33063715 | C-T | Homo | INTERGENIC | |
| SBS | Chr4 | 16875286 | G-T | Homo | INTRON | |
| SBS | Chr4 | 19430891 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 23775910 | T-A | Homo | NON_SYNONYMOUS_CODING | OsKitaake04g150400 |
| SBS | Chr4 | 23775913 | T-A | Homo | NON_SYNONYMOUS_CODING | OsKitaake04g150400 |
| SBS | Chr4 | 23778899 | A-G | Homo | INTRON | |
| SBS | Chr4 | 32735214 | T-C | Homo | INTERGENIC | |
| SBS | Chr5 | 17712092 | G-A | Homo | INTERGENIC | |
| SBS | Chr6 | 13171666 | T-C | Homo | INTERGENIC | |
| SBS | Chr7 | 28665025 | A-C | Homo | INTERGENIC | |
| SBS | Chr8 | 28365942 | T-C | Homo | INTRON | |
| SBS | Chr9 | 1359382 | G-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 5947082 | C-T | Homo | INTERGENIC | |
| SBS | Chr10 | 8079769 | T-A | Homo | INTERGENIC | |
| SBS | Chr10 | 9064972 | C-A | Homo | INTERGENIC | |
| SBS | Chr10 | 16267963 | C-T | Homo | INTERGENIC | |
| SBS | Chr11 | 14403815 | G-A | Homo | INTERGENIC | |
| SBS | Chr11 | 28786104 | A-G | Hetero | INTRON | |
| SBS | Chr12 | 23791475 | C-T | Homo | INTERGENIC |
Deletions: 17
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 22561 | 22562 | 1 | |
| Deletion | Chr11 | 1433833 | 1433835 | 2 | OsKitaake11g018700 |
| Deletion | Chr11 | 2919911 | 2919912 | 1 | |
| Deletion | Chr12 | 7410386 | 7410388 | 2 | |
| Deletion | Chr2 | 13355444 | 13355449 | 5 | |
| Deletion | Chr11 | 13981997 | 13981999 | 2 | |
| Deletion | Chr1 | 17285421 | 17285794 | 373 | |
| Deletion | Chr8 | 17980695 | 17980696 | 1 | |
| Deletion | Chr11 | 18934231 | 18934232 | 1 | OsKitaake11g147600 |
| Deletion | Chr2 | 19382039 | 19382040 | 1 | |
| Deletion | Chr9 | 20561113 | 20561116 | 3 | |
| Deletion | Chr8 | 20851292 | 20851298 | 6 | |
| Deletion | Chr6 | 22161453 | 22161454 | 1 | |
| Deletion | Chr4 | 25930493 | 25930586 | 93 | |
| Deletion | Chr5 | 30211755 | 30211756 | 1 | |
| Deletion | Chr4 | 34212244 | 34212251 | 7 | |
| Deletion | Chr1 | 37600951 | 37600952 | 1 |
Insertions: 6
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr7 | 24524126 | 24524129 | 2 | |
| Insertion | Chr8 | 13854866 | 13854869 | 2 | |
| Insertion | Chr11 | 11016564 | 11016566 | 1 | |
| Insertion | Chr12 | 7286260 | 7286262 | 1 | |
| Insertion | Chr4 | 24151137 | 24151139 | 1 | OsKitaake04g154900  |
| Insertion | Chr12 | 14779926 | 14779928 | 1 |
Translocations: 1
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr11 | 25741681 | Chr9 | 3231228 |