Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN-137 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN-137 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 29
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 13866563 | G-C | Homo | INTERGENIC | |
| SBS | Chr1 | 38769729 | G-A | Homo | NON_SYNONYMOUS_CODING | OsKitaake01g415000 |
| SBS | Chr1 | 41466059 | C-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 12341422 | T-G | Homo | INTERGENIC | |
| SBS | Chr2 | 17005246 | T-A | Homo | INTERGENIC | |
| SBS | Chr2 | 33994056 | C-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 36208749 | G-A | Hetero | INTRON | |
| SBS | Chr2 | 36208750 | T-A | Hetero | INTRON | |
| SBS | Chr3 | 14579977 | A-T | Homo | INTERGENIC | |
| SBS | Chr3 | 21483494 | C-T | Homo | INTERGENIC | |
| SBS | Chr3 | 36588691 | A-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 36588692 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 20495314 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 24562221 | G-C | Hetero | INTERGENIC | |
| SBS | Chr4 | 27103828 | A-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 29990722 | C-T | Homo | INTERGENIC | |
| SBS | Chr4 | 36517703 | T-A | Hetero | NON_SYNONYMOUS_CODING | OsKitaake04g318000 |
| SBS | Chr5 | 344465 | G-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 19480506 | A-G | Homo | INTERGENIC | |
| SBS | Chr6 | 204098 | A-G | Hetero | INTERGENIC | |
| SBS | Chr7 | 6981166 | A-T | Hetero | INTERGENIC | |
| SBS | Chr7 | 9281877 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 16878056 | G-A | Hetero | INTERGENIC | |
| SBS | Chr8 | 21835954 | T-C | Hetero | INTERGENIC | |
| SBS | Chr8 | 26696450 | T-G | Hetero | NON_SYNONYMOUS_CODING | OsKitaake08g215300 |
| SBS | Chr9 | 11583396 | T-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 14232524 | T-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 21082244 | G-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 12302752 | T-G | Homo | INTERGENIC |
Deletions: 15
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr10 | 3567382 | 3567473 | 91 | |
| Deletion | Chr12 | 4549771 | 4549772 | 1 | OsKitaake12g060500 |
| Deletion | Chr8 | 5253495 | 5253502 | 7 | |
| Deletion | Chr5 | 5893760 | 5893848 | 88 | |
| Deletion | Chr1 | 11889380 | 11889384 | 4 | |
| Deletion | Chr8 | 12686013 | 12686019 | 6 | |
| Deletion | Chr1 | 13581239 | 13581241 | 2 | |
| Deletion | Chr8 | 18229103 | 18229113 | 10 | |
| Deletion | Chr3 | 18416187 | 18416188 | 1 | |
| Deletion | Chr6 | 22189470 | 22189473 | 3 | |
| Deletion | Chr6 | 22854435 | 22854442 | 7 | |
| Deletion | Chr1 | 24813217 | 24813218 | 1 | OsKitaake01g239700 |
| Deletion | Chr12 | 26065908 | 26065914 | 6 | |
| Deletion | Chr2 | 33814050 | 33814055 | 5 | |
| Deletion | Chr1 | 41764786 | 41764802 | 16 |
Insertions: 1
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr4 | 30810632 | 30810635 | 2 |