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Mutant Information

Mutant Name	FN-151 [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN-151 Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 36

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 4259190 T-G Hetero INTRON
SBS Chr1 12021161 C-T Hetero INTERGENIC
SBS Chr1 13024842 G-C Hetero INTERGENIC
SBS Chr1 42093878 C-T Hetero INTERGENIC
SBS Chr2 10280343 T-A Hetero INTERGENIC
SBS Chr2 10653320 T-A Hetero INTERGENIC
SBS Chr2 24696044 G-A Hetero INTERGENIC
SBS Chr3 46951 G-A Hetero INTERGENIC
SBS Chr3 8147271 G-C Hetero INTERGENIC
SBS Chr4 10958352 G-A Hetero INTERGENIC
SBS Chr4 22732391 T-C Hetero INTRON
SBS Chr5 13538508 C-G Hetero INTERGENIC
SBS Chr5 18889768 C-T Hetero INTERGENIC
SBS Chr5 21534789 C-A Hetero INTERGENIC
SBS Chr5 22652234 C-T Homo INTERGENIC
SBS Chr7 1625412 A-C Hetero NON_SYNONYMOUS_CODING OsKitaake07g022100
SBS Chr7 6010170 C-T Hetero INTERGENIC
SBS Chr7 13537100 T-A Hetero INTERGENIC
SBS Chr7 21486408 A-C Homo INTERGENIC
SBS Chr7 27151975 G-A Hetero INTERGENIC
SBS Chr8 26570827 T-C Hetero INTERGENIC
SBS Chr9 6145390 A-T Hetero INTERGENIC
SBS Chr9 6272477 A-T Hetero NON_SYNONYMOUS_CODING OsKitaake09g036500
SBS Chr9 13433798 G-A Hetero INTERGENIC
SBS Chr9 14349582 G-A Hetero INTERGENIC
SBS Chr10 433162 G-A Hetero NON_SYNONYMOUS_CODING OsKitaake10g003000
SBS Chr10 12963420 T-A Homo INTERGENIC
SBS Chr10 14918490 C-T Hetero INTERGENIC
SBS Chr10 14918491 C-T Hetero INTERGENIC
SBS Chr11 14674067 G-A Hetero INTERGENIC
SBS Chr12 116031 T-C Hetero INTRON
SBS Chr12 7945420 C-A Hetero INTERGENIC
SBS Chr12 7945421 G-A Hetero INTERGENIC
SBS Chr12 9935148 A-T Hetero INTERGENIC
SBS Chr12 16050944 T-A Homo INTERGENIC
SBS Chr12 16252411 A-G Homo INTERGENIC

Deletions: 15

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr10 252365 252547 182
Deletion Chr10 6601864 6601880 16
Deletion Chr10 9319025 9319038 13
Deletion Chr5 10425001 10469000 43999
Deletion Chr7 11562654 11562656 2
Deletion Chr8 12398998 12398999 1
Deletion Chr6 14886843 14886860 17
Deletion Chr12 15559754 15559767 13
Deletion Chr6 18430269 18430275 6
Deletion Chr11 19846793 19846794 1 OsKitaake11g155200
Deletion Chr7 20783104 20783105 1
Deletion Chr2 21376043 21376044 1
Deletion Chr12 21927903 21927912 9
Deletion Chr11 26537400 26537402 2
Deletion Chr3 32388537 32388540 3

Insertions: 2

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr2 18402626 18402631 4
Insertion Chr3 22175582 22175605 22 OsKitaake03g241635

Translocations: 8

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation Chr9 6366799 Chr2 27819821 OsKitaake02g279900
Translocation Chr9 6366800 Chr5 9570414 OsKitaake05g088100
Translocation Chr5 9575000 Chr2 27820242
Translocation Chr9 14674258 Chr3 11350191
Translocation Chr9 14674259 Chr3 11350494
Translocation Chr2 20691945 Chr1 17997912
Translocation Chr10 23553724 Chr2 29663737 OsKitaake02g299601
Translocation Chr10 23553750 Chr2 29666428

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	4259190	T-G	Hetero	INTRON
SBS	Chr1	12021161	C-T	Hetero	INTERGENIC
SBS	Chr1	13024842	G-C	Hetero	INTERGENIC
SBS	Chr1	42093878	C-T	Hetero	INTERGENIC
SBS	Chr2	10280343	T-A	Hetero	INTERGENIC
SBS	Chr2	10653320	T-A	Hetero	INTERGENIC
SBS	Chr2	24696044	G-A	Hetero	INTERGENIC
SBS	Chr3	46951	G-A	Hetero	INTERGENIC
SBS	Chr3	8147271	G-C	Hetero	INTERGENIC
SBS	Chr4	10958352	G-A	Hetero	INTERGENIC
SBS	Chr4	22732391	T-C	Hetero	INTRON
SBS	Chr5	13538508	C-G	Hetero	INTERGENIC
SBS	Chr5	18889768	C-T	Hetero	INTERGENIC
SBS	Chr5	21534789	C-A	Hetero	INTERGENIC
SBS	Chr5	22652234	C-T	Homo	INTERGENIC
SBS	Chr7	1625412	A-C	Hetero	NON_SYNONYMOUS_CODING	OsKitaake07g022100
SBS	Chr7	6010170	C-T	Hetero	INTERGENIC
SBS	Chr7	13537100	T-A	Hetero	INTERGENIC
SBS	Chr7	21486408	A-C	Homo	INTERGENIC
SBS	Chr7	27151975	G-A	Hetero	INTERGENIC
SBS	Chr8	26570827	T-C	Hetero	INTERGENIC
SBS	Chr9	6145390	A-T	Hetero	INTERGENIC
SBS	Chr9	6272477	A-T	Hetero	NON_SYNONYMOUS_CODING	OsKitaake09g036500
SBS	Chr9	13433798	G-A	Hetero	INTERGENIC
SBS	Chr9	14349582	G-A	Hetero	INTERGENIC
SBS	Chr10	433162	G-A	Hetero	NON_SYNONYMOUS_CODING	OsKitaake10g003000
SBS	Chr10	12963420	T-A	Homo	INTERGENIC
SBS	Chr10	14918490	C-T	Hetero	INTERGENIC
SBS	Chr10	14918491	C-T	Hetero	INTERGENIC
SBS	Chr11	14674067	G-A	Hetero	INTERGENIC
SBS	Chr12	116031	T-C	Hetero	INTRON
SBS	Chr12	7945420	C-A	Hetero	INTERGENIC
SBS	Chr12	7945421	G-A	Hetero	INTERGENIC
SBS	Chr12	9935148	A-T	Hetero	INTERGENIC
SBS	Chr12	16050944	T-A	Homo	INTERGENIC
SBS	Chr12	16252411	A-G	Homo	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr10	252365	252547	182
Deletion	Chr10	6601864	6601880	16
Deletion	Chr10	9319025	9319038	13
Deletion	Chr5	10425001	10469000	43999
Deletion	Chr7	11562654	11562656	2
Deletion	Chr8	12398998	12398999	1
Deletion	Chr6	14886843	14886860	17
Deletion	Chr12	15559754	15559767	13
Deletion	Chr6	18430269	18430275	6
Deletion	Chr11	19846793	19846794	1	OsKitaake11g155200
Deletion	Chr7	20783104	20783105	1
Deletion	Chr2	21376043	21376044	1
Deletion	Chr12	21927903	21927912	9
Deletion	Chr11	26537400	26537402	2
Deletion	Chr3	32388537	32388540	3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	6366799	Chr2	27819821	OsKitaake02g279900
Translocation	Chr9	6366800	Chr5	9570414	OsKitaake05g088100
Translocation	Chr5	9575000	Chr2	27820242
Translocation	Chr9	14674258	Chr3	11350191
Translocation	Chr9	14674259	Chr3	11350494
Translocation	Chr2	20691945	Chr1	17997912
Translocation	Chr10	23553724	Chr2	29663737	OsKitaake02g299601
Translocation	Chr10	23553750	Chr2	29666428

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Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes