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Mutant Information

Mutant Name	FN-207 [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN-207 Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 46

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 11335547 G-A Hetero INTRON
SBS Chr1 16397465 T-A Hetero INTERGENIC
SBS Chr1 16484590 A-G Hetero INTERGENIC
SBS Chr1 20828842 A-G Hetero INTRON
SBS Chr1 22778276 G-T Hetero SYNONYMOUS_CODING
SBS Chr1 25696787 C-T Hetero INTERGENIC
SBS Chr1 30627101 G-A Homo INTERGENIC
SBS Chr1 31515274 C-T Homo INTERGENIC
SBS Chr1 34089517 T-C Homo INTRON
SBS Chr2 8083046 T-C Hetero INTERGENIC
SBS Chr2 13054817 C-T Homo INTERGENIC
SBS Chr2 13660587 G-A Hetero INTERGENIC
SBS Chr2 14158994 C-A Hetero INTERGENIC
SBS Chr3 542784 G-C Homo INTERGENIC
SBS Chr3 16071793 A-G Homo INTERGENIC
SBS Chr3 16071794 A-T Homo INTERGENIC
SBS Chr3 17870367 T-G Homo INTERGENIC
SBS Chr3 19407666 C-T Hetero INTERGENIC
SBS Chr4 770412 C-T Hetero INTERGENIC
SBS Chr4 3903206 G-A Homo INTERGENIC
SBS Chr4 4860040 A-C Hetero INTERGENIC
SBS Chr4 7173256 C-T Hetero INTERGENIC
SBS Chr4 7173257 T-A Hetero INTERGENIC
SBS Chr4 29780843 T-C Hetero INTRON
SBS Chr4 33043132 T-A Hetero INTERGENIC
SBS Chr5 2258284 C-T Homo INTERGENIC
SBS Chr5 6685529 T-A Homo INTERGENIC
SBS Chr5 11923804 C-A Hetero INTERGENIC
SBS Chr5 24799077 G-A Hetero INTRON
SBS Chr6 21155619 G-A Homo INTERGENIC
SBS Chr7 4655091 G-A Hetero INTERGENIC
SBS Chr7 16082001 C-T Hetero INTRON
SBS Chr7 16082002 T-G Hetero INTRON
SBS Chr7 22603690 G-T Homo INTERGENIC
SBS Chr7 29341155 T-A Hetero INTERGENIC
SBS Chr8 20491069 G-A Hetero INTERGENIC
SBS Chr9 1678559 C-A Hetero INTERGENIC
SBS Chr9 5762574 G-C Hetero INTERGENIC
SBS Chr10 11717548 G-A Hetero INTERGENIC
SBS Chr11 10381899 G-C Hetero INTERGENIC
SBS Chr11 21729463 G-A Hetero INTERGENIC
SBS Chr11 23992822 A-T Hetero SYNONYMOUS_CODING
SBS Chr12 6799543 C-T Hetero INTERGENIC
SBS Chr12 12404308 C-T Hetero INTERGENIC
SBS Chr12 16435799 C-T Hetero INTERGENIC
SBS Chr12 25959491 A-C Hetero INTERGENIC

Deletions: 11

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr6 89043 89396 353
Deletion Chr6 609247 609257 10
Deletion Chr12 2757467 2757626 159
Deletion Chr12 8900280 8900282 2
Deletion Chr1 8947129 8947130 1
Deletion Chr7 14030617 14030818 201 OsKitaake07g121100
Deletion Chr1 17186689 17186844 155
Deletion Chr1 17528442 17528444 2
Deletion Chr12 19401800 19401892 92
Deletion Chr6 27120836 27120848 12
Deletion Chr3 30224157 30224158 1

Insertions: 7

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr1 5094526 5094529 2
Insertion Chr10 3785395 3785398 2
Insertion Chr4 4457804 4457806 1
Insertion Chr4 9891532 9891534 1
Insertion Chr5 9695636 9695638 1 OsKitaake05g088800
Insertion Chr6 12258076 12258079 2
Insertion Chr8 17299694 17299698 3

Translocations: 4

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation Chr2 18729532 Chr1 22931886 2
Translocation Chr11 24849596 Chr1 27772652 OsKitaake11g202100
Translocation Chr11 24851305 Chr1 27773796
Translocation Chr2 33241110 Chr1 21121219

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11335547	G-A	Hetero	INTRON
SBS	Chr1	16397465	T-A	Hetero	INTERGENIC
SBS	Chr1	16484590	A-G	Hetero	INTERGENIC
SBS	Chr1	20828842	A-G	Hetero	INTRON
SBS	Chr1	22778276	G-T	Hetero	SYNONYMOUS_CODING
SBS	Chr1	25696787	C-T	Hetero	INTERGENIC
SBS	Chr1	30627101	G-A	Homo	INTERGENIC
SBS	Chr1	31515274	C-T	Homo	INTERGENIC
SBS	Chr1	34089517	T-C	Homo	INTRON
SBS	Chr2	8083046	T-C	Hetero	INTERGENIC
SBS	Chr2	13054817	C-T	Homo	INTERGENIC
SBS	Chr2	13660587	G-A	Hetero	INTERGENIC
SBS	Chr2	14158994	C-A	Hetero	INTERGENIC
SBS	Chr3	542784	G-C	Homo	INTERGENIC
SBS	Chr3	16071793	A-G	Homo	INTERGENIC
SBS	Chr3	16071794	A-T	Homo	INTERGENIC
SBS	Chr3	17870367	T-G	Homo	INTERGENIC
SBS	Chr3	19407666	C-T	Hetero	INTERGENIC
SBS	Chr4	770412	C-T	Hetero	INTERGENIC
SBS	Chr4	3903206	G-A	Homo	INTERGENIC
SBS	Chr4	4860040	A-C	Hetero	INTERGENIC
SBS	Chr4	7173256	C-T	Hetero	INTERGENIC
SBS	Chr4	7173257	T-A	Hetero	INTERGENIC
SBS	Chr4	29780843	T-C	Hetero	INTRON
SBS	Chr4	33043132	T-A	Hetero	INTERGENIC
SBS	Chr5	2258284	C-T	Homo	INTERGENIC
SBS	Chr5	6685529	T-A	Homo	INTERGENIC
SBS	Chr5	11923804	C-A	Hetero	INTERGENIC
SBS	Chr5	24799077	G-A	Hetero	INTRON
SBS	Chr6	21155619	G-A	Homo	INTERGENIC
SBS	Chr7	4655091	G-A	Hetero	INTERGENIC
SBS	Chr7	16082001	C-T	Hetero	INTRON
SBS	Chr7	16082002	T-G	Hetero	INTRON
SBS	Chr7	22603690	G-T	Homo	INTERGENIC
SBS	Chr7	29341155	T-A	Hetero	INTERGENIC
SBS	Chr8	20491069	G-A	Hetero	INTERGENIC
SBS	Chr9	1678559	C-A	Hetero	INTERGENIC
SBS	Chr9	5762574	G-C	Hetero	INTERGENIC
SBS	Chr10	11717548	G-A	Hetero	INTERGENIC
SBS	Chr11	10381899	G-C	Hetero	INTERGENIC
SBS	Chr11	21729463	G-A	Hetero	INTERGENIC
SBS	Chr11	23992822	A-T	Hetero	SYNONYMOUS_CODING
SBS	Chr12	6799543	C-T	Hetero	INTERGENIC
SBS	Chr12	12404308	C-T	Hetero	INTERGENIC
SBS	Chr12	16435799	C-T	Hetero	INTERGENIC
SBS	Chr12	25959491	A-C	Hetero	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr6	89043	89396	353
Deletion	Chr6	609247	609257	10
Deletion	Chr12	2757467	2757626	159
Deletion	Chr12	8900280	8900282	2
Deletion	Chr1	8947129	8947130	1
Deletion	Chr7	14030617	14030818	201	OsKitaake07g121100
Deletion	Chr1	17186689	17186844	155
Deletion	Chr1	17528442	17528444	2
Deletion	Chr12	19401800	19401892	92
Deletion	Chr6	27120836	27120848	12
Deletion	Chr3	30224157	30224158	1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr2	18729532	Chr1	22931886	2
Translocation	Chr11	24849596	Chr1	27772652	OsKitaake11g202100
Translocation	Chr11	24851305	Chr1	27773796
Translocation	Chr2	33241110	Chr1	21121219

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Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes