Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN-220 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN-220 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 28
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 2299553 | A-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 36338355 | T-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 1570344 | A-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 12456788 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 161370 | G-C | Homo | INTERGENIC | |
| SBS | Chr3 | 22862811 | C-A | Hetero | INTRON | |
| SBS | Chr4 | 19207684 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 26372952 | T-C | Homo | INTERGENIC | |
| SBS | Chr5 | 12152179 | C-T | Homo | INTERGENIC | |
| SBS | Chr6 | 268753 | A-C | Hetero | INTERGENIC | |
| SBS | Chr6 | 6556699 | A-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 6556707 | T-G | Hetero | INTERGENIC | |
| SBS | Chr6 | 7100758 | C-T | Homo | INTERGENIC | |
| SBS | Chr6 | 23479730 | A-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 197766 | G-C | Hetero | INTERGENIC | |
| SBS | Chr8 | 9401287 | C-T | Homo | INTERGENIC | |
| SBS | Chr8 | 11278662 | C-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 15323293 | C-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 7563552 | A-C | Hetero | INTERGENIC | |
| SBS | Chr9 | 13411885 | G-C | Hetero | INTERGENIC | |
| SBS | Chr10 | 7825608 | G-C | Hetero | INTERGENIC | |
| SBS | Chr10 | 10023096 | G-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 10231484 | G-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 10231485 | C-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 13051798 | T-C | Homo | INTERGENIC | |
| SBS | Chr11 | 6170112 | G-A | Homo | INTERGENIC | |
| SBS | Chr11 | 20836376 | T-C | Hetero | INTERGENIC | |
| SBS | Chr12 | 21687798 | T-G | Homo | INTERGENIC |
Deletions: 13
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr7 | 4145552 | 4145558 | 6 | |
| Deletion | Chr7 | 4649935 | 4649937 | 2 | |
| Deletion | Chr7 | 8301454 | 8301456 | 2 | |
| Deletion | Chr12 | 9611428 | 9611429 | 1 | |
| Deletion | Chr3 | 10751952 | 10752207 | 255 | |
| Deletion | Chr6 | 11915541 | 11915544 | 3 | |
| Deletion | Chr10 | 12644968 | 12644973 | 5 | |
| Deletion | Chr11 | 14872651 | 14872655 | 4 | |
| Deletion | Chr4 | 17154704 | 17154716 | 12 | |
| Deletion | Chr2 | 17339527 | 17339635 | 108 | OsKitaake02g174100 |
| Deletion | Chr7 | 18335105 | 18335107 | 2 | |
| Deletion | Chr7 | 18463557 | 18463567 | 10 | |
| Deletion | Chr12 | 26729847 | 26729862 | 15 |
Insertions: 3
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr8 | 3379517 | 3379520 | 2 | |
| Insertion | Chr5 | 10944141 | 10944143 | 1 | |
| Insertion | Chr6 | 4888 | 4891 | 2 |
Inversions: 2
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr4 | 26288187 | 26525811 | |
| Inversion | Chr4 | 26288199 | 26525856 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr11 | 29580694 | Chr9 | 22135679 | |
| Translocation | Chr11 | 29580700 | Chr9 | 22133059 | OsKitaake09g199300 |