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| Mutant Information |
|---|
| Mutant Name | FN-398-3-4-5 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN-398-3-4-5 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 10
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 11771592 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 12840527 | T-G | Hetero | UTR_3_PRIME | |
| SBS | Chr2 | 11213782 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 30414167 | G-C | Hetero | UTR_3_PRIME | |
| SBS | Chr4 | 13700793 | C-T | Hetero | INTERGENIC | |
| SBS | Chr5 | 19507943 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 21365422 | T-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 26229232 | T-A | Hetero | INTRON | |
| SBS | Chr9 | 16810092 | G-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 8843792 | G-A | Hetero | INTERGENIC |
Deletions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr2 | 1347710 | 1347712 | 2 | |
| Deletion | Chr10 | 10992192 | 10992194 | 2 | OsKitaake10g065000 |
| Deletion | Chr2 | 35205094 | 35205098 | 4 | |
| Deletion | Chr1 | 42560001 | 42645000 | 84999 | 16 |