Search Kitaake

Mutant Information

Mutant Name	FN1084-S [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN1084-S Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 29

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 4725023 G-A Homo INTERGENIC
SBS Chr1 10538958 G-T Homo INTERGENIC
SBS Chr1 15081502 G-A Hetero INTERGENIC
SBS Chr1 21845113 G-A Homo INTERGENIC
SBS Chr1 23718985 G-A Hetero INTERGENIC
SBS Chr1 39015843 G-A Hetero INTERGENIC
SBS Chr1 43442187 G-A Homo INTERGENIC
SBS Chr3 8298140 A-T Hetero INTERGENIC
SBS Chr3 8298142 A-T Hetero INTERGENIC
SBS Chr3 23690126 C-T Homo INTERGENIC
SBS Chr5 8211592 C-T Hetero INTERGENIC
SBS Chr5 12388194 C-T Hetero INTERGENIC
SBS Chr6 1476307 T-C Hetero INTRON
SBS Chr6 8997315 C-T Homo INTERGENIC
SBS Chr6 20080399 G-A Homo INTERGENIC
SBS Chr7 13693222 A-G Hetero INTERGENIC
SBS Chr7 20830834 T-G Homo INTERGENIC
SBS Chr7 20830838 G-A Homo INTERGENIC
SBS Chr7 24562767 G-C Homo INTERGENIC
SBS Chr8 1066576 C-G Hetero INTERGENIC
SBS Chr8 18664721 C-T Hetero INTERGENIC
SBS Chr10 5041615 C-T Hetero INTERGENIC
SBS Chr10 7581928 G-A Homo INTERGENIC
SBS Chr10 9123850 A-T Homo INTERGENIC
SBS Chr11 2446715 A-C Hetero INTERGENIC
SBS Chr11 3162706 T-A Hetero INTERGENIC
SBS Chr11 16230898 G-C Homo INTERGENIC
SBS Chr11 24223655 T-C Hetero INTERGENIC
SBS Chr12 15911738 G-A Hetero INTERGENIC

Deletions: 9

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr1 3464573 3464581 8
Deletion Chr1 3743140 3743141 1
Deletion Chr11 5815001 5832000 16999
Deletion Chr10 6205663 6205664 1
Deletion Chr5 9337001 9373000 35999 2
Deletion Chr7 12802549 12802560 11
Deletion Chr1 13956728 13956729 1
Deletion Chr9 21152775 21152781 6
Deletion Chr6 21584035 21584036 1

Insertions: 7

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr7 14159851 14159853 1
Insertion Chr7 26029878 26029881 2
Insertion Chr11 14768255 14768258 2
Insertion Chr12 10016519 10016523 3
Insertion Chr7 9047214 9047219 4
Insertion Chr8 8067714 8067716 1
Insertion Chr9 2667591 2667595 3

Inversions: 2

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion Chr9 430757 443006
Inversion Chr9 430760 443004

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	4725023	G-A	Homo	INTERGENIC
SBS	Chr1	10538958	G-T	Homo	INTERGENIC
SBS	Chr1	15081502	G-A	Hetero	INTERGENIC
SBS	Chr1	21845113	G-A	Homo	INTERGENIC
SBS	Chr1	23718985	G-A	Hetero	INTERGENIC
SBS	Chr1	39015843	G-A	Hetero	INTERGENIC
SBS	Chr1	43442187	G-A	Homo	INTERGENIC
SBS	Chr3	8298140	A-T	Hetero	INTERGENIC
SBS	Chr3	8298142	A-T	Hetero	INTERGENIC
SBS	Chr3	23690126	C-T	Homo	INTERGENIC
SBS	Chr5	8211592	C-T	Hetero	INTERGENIC
SBS	Chr5	12388194	C-T	Hetero	INTERGENIC
SBS	Chr6	1476307	T-C	Hetero	INTRON
SBS	Chr6	8997315	C-T	Homo	INTERGENIC
SBS	Chr6	20080399	G-A	Homo	INTERGENIC
SBS	Chr7	13693222	A-G	Hetero	INTERGENIC
SBS	Chr7	20830834	T-G	Homo	INTERGENIC
SBS	Chr7	20830838	G-A	Homo	INTERGENIC
SBS	Chr7	24562767	G-C	Homo	INTERGENIC
SBS	Chr8	1066576	C-G	Hetero	INTERGENIC
SBS	Chr8	18664721	C-T	Hetero	INTERGENIC
SBS	Chr10	5041615	C-T	Hetero	INTERGENIC
SBS	Chr10	7581928	G-A	Homo	INTERGENIC
SBS	Chr10	9123850	A-T	Homo	INTERGENIC
SBS	Chr11	2446715	A-C	Hetero	INTERGENIC
SBS	Chr11	3162706	T-A	Hetero	INTERGENIC
SBS	Chr11	16230898	G-C	Homo	INTERGENIC
SBS	Chr11	24223655	T-C	Hetero	INTERGENIC
SBS	Chr12	15911738	G-A	Hetero	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr1	3464573	3464581	8
Deletion	Chr1	3743140	3743141	1
Deletion	Chr11	5815001	5832000	16999
Deletion	Chr10	6205663	6205664	1
Deletion	Chr5	9337001	9373000	35999	2
Deletion	Chr7	12802549	12802560	11
Deletion	Chr1	13956728	13956729	1
Deletion	Chr9	21152775	21152781	6
Deletion	Chr6	21584035	21584036	1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	430757	443006
Inversion	Chr9	430760	443004

Main menu

You are here

Search Kitaake

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Position 2

Number of Genes