Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN1115-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN1115-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 40
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 7351659 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 24648272 | C-T | Homo | INTERGENIC | |
| SBS | Chr1 | 36238877 | T-G | Hetero | UTR_3_PRIME | |
| SBS | Chr1 | 36821157 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 37130831 | A-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 42513807 | G-A | Hetero | INTRON | |
| SBS | Chr2 | 663301 | A-G | Hetero | INTRON | |
| SBS | Chr2 | 29815528 | A-T | Homo | INTERGENIC | |
| SBS | Chr3 | 340572 | C-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 7116007 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 16063428 | G-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 25343746 | T-A | Hetero | INTRON | |
| SBS | Chr3 | 25343747 | A-T | Hetero | INTRON | |
| SBS | Chr3 | 28653414 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 30543741 | A-G | Hetero | INTERGENIC | |
| SBS | Chr4 | 1384914 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 3391120 | G-C | Hetero | INTERGENIC | |
| SBS | Chr4 | 4208898 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 24915842 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 32644774 | G-T | Homo | INTERGENIC | |
| SBS | Chr5 | 2943863 | T-C | Hetero | INTERGENIC | |
| SBS | Chr5 | 28110285 | C-T | Homo | INTERGENIC | |
| SBS | Chr6 | 25254666 | G-C | Hetero | INTERGENIC | |
| SBS | Chr7 | 13393131 | C-T | Hetero | INTERGENIC | |
| SBS | Chr7 | 20827585 | C-T | Homo | INTERGENIC | |
| SBS | Chr8 | 2254850 | T-C | Homo | INTERGENIC | |
| SBS | Chr8 | 4808486 | C-A | Homo | INTERGENIC | |
| SBS | Chr8 | 8037596 | C-A | Hetero | INTERGENIC | |
| SBS | Chr8 | 13417572 | C-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 19339107 | C-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 12639950 | A-C | Hetero | INTERGENIC | |
| SBS | Chr9 | 20626106 | C-T | Homo | INTERGENIC | |
| SBS | Chr10 | 16933421 | G-T | Homo | INTERGENIC | |
| SBS | Chr10 | 20874542 | A-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 15380490 | G-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 17718348 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 1790626 | A-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 4191974 | T-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 10955490 | C-T | Hetero | INTRON | |
| SBS | Chr12 | 26195796 | G-A | Hetero | UTR_5_PRIME |
Deletions: 9
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr3 | 6986145 | 6986148 | 3 | |
| Deletion | Chr6 | 12321001 | 12321002 | 1 | OsKitaake06g131900 |
| Deletion | Chr8 | 13490546 | 13490548 | 2 | |
| Deletion | Chr2 | 16718468 | 16718838 | 370 | |
| Deletion | Chr9 | 18543934 | 18543936 | 2 | |
| Deletion | Chr5 | 22336940 | 22336946 | 6 | |
| Deletion | Chr1 | 25716571 | 25716585 | 14 | |
| Deletion | Chr2 | 26419307 | 26419308 | 1 | |
| Deletion | Chr1 | 27751276 | 27751277 | 1 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr1 | 12050718 | 12050721 | 2 | |
| Insertion | Chr11 | 20095979 | 20095982 | 2 | |
| Insertion | Chr1 | 6413509 | 6413512 | 2 | |
| Insertion | Chr2 | 10324700 | 10324702 | 1 |