Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN1150-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN1150-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 32
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 7896259 | A-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 11091778 | C-T | Homo | INTERGENIC | |
| SBS | Chr1 | 22754295 | C-G | Homo | INTERGENIC | |
| SBS | Chr1 | 26387600 | G-C | Homo | INTERGENIC | |
| SBS | Chr1 | 35463485 | G-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 6813089 | C-T | Homo | INTRON | |
| SBS | Chr2 | 8710796 | C-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 10012660 | G-A | Homo | INTERGENIC | |
| SBS | Chr2 | 12706059 | C-T | Homo | NON_SYNONYMOUS_CODING | OsKitaake02g142100 |
| SBS | Chr2 | 30919984 | G-A | Homo | INTERGENIC | |
| SBS | Chr3 | 30483772 | C-G | Hetero | INTERGENIC | |
| SBS | Chr4 | 354277 | C-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 14554150 | C-A | Hetero | STOP_GAINED | OsKitaake04g069200 |
| SBS | Chr4 | 18001809 | T-C | Hetero | INTERGENIC | |
| SBS | Chr4 | 24979700 | T-G | Hetero | INTRON | |
| SBS | Chr4 | 25434100 | T-A | Hetero | INTRON | |
| SBS | Chr5 | 5509442 | A-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 12867195 | G-A | Homo | INTERGENIC | |
| SBS | Chr6 | 28194509 | A-C | Hetero | INTRON | |
| SBS | Chr6 | 29246320 | G-A | Hetero | SYNONYMOUS_CODING | |
| SBS | Chr6 | 30130882 | G-T | Hetero | INTRON | |
| SBS | Chr7 | 7602248 | G-T | Hetero | INTERGENIC | |
| SBS | Chr7 | 17724745 | T-A | Homo | INTRON | |
| SBS | Chr7 | 25813227 | C-A | Homo | INTERGENIC | |
| SBS | Chr8 | 12843188 | G-C | Hetero | INTERGENIC | |
| SBS | Chr8 | 19978007 | A-G | Hetero | INTERGENIC | |
| SBS | Chr8 | 28929648 | G-C | Hetero | INTERGENIC | |
| SBS | Chr10 | 20765275 | A-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 10606907 | G-A | Homo | INTERGENIC | |
| SBS | Chr12 | 870141 | G-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 4930110 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 26314003 | T-C | Hetero | INTERGENIC |
Deletions: 12
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr9 | 763063 | 763066 | 3 | |
| Deletion | Chr11 | 3256414 | 3256418 | 4 | |
| Deletion | Chr1 | 4468088 | 4468089 | 1 | |
| Deletion | Chr1 | 6372624 | 6372629 | 5 | |
| Deletion | Chr9 | 10876731 | 10876733 | 2 | |
| Deletion | Chr12 | 11001018 | 11001019 | 1 | OsKitaake12g101700 |
| Deletion | Chr6 | 11289862 | 11289870 | 8 | |
| Deletion | Chr7 | 13725001 | 13729000 | 3999 | |
| Deletion | Chr7 | 18842522 | 18842524 | 2 | |
| Deletion | Chr1 | 21369141 | 21369149 | 8 | |
| Deletion | Chr2 | 28722451 | 28722452 | 1 | |
| Deletion | Chr2 | 28735807 | 28735816 | 9 | OsKitaake02g289000 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr3 | 8297934 | 8297937 | 2 | |
| Insertion | Chr4 | 32016344 | 32016347 | 2 | |
| Insertion | Chr5 | 5510289 | 5510292 | 2 | |
| Insertion | Chr8 | 18786640 | 18786650 | 9 |
Inversions: 2
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr1 | 27932075 | 28494403 | OsKitaake01g276466 |
| Inversion | Chr1 | 27932163 | 28494415 | OsKitaake01g276466 |