Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN1736-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN1736-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 19
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 2172869 | T-C | Homo | INTERGENIC | |
| SBS | Chr1 | 35382571 | G-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 36098730 | C-T | Hetero | NON_SYNONYMOUS_CODING | OsKitaake01g383000 |
| SBS | Chr1 | 37385311 | G-A | Hetero | INTRON | |
| SBS | Chr2 | 15232218 | T-C | Homo | INTERGENIC | |
| SBS | Chr2 | 28673660 | C-G | Homo | INTERGENIC | |
| SBS | Chr3 | 14255903 | C-T | Homo | INTERGENIC | |
| SBS | Chr4 | 1757793 | T-G | Hetero | INTRON | |
| SBS | Chr4 | 3091323 | A-G | Hetero | INTERGENIC | |
| SBS | Chr4 | 3391120 | G-C | Hetero | INTERGENIC | |
| SBS | Chr4 | 14921825 | C-T | Homo | INTERGENIC | |
| SBS | Chr7 | 2351512 | C-T | Homo | INTERGENIC | |
| SBS | Chr7 | 5562709 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 13940539 | A-C | Hetero | INTERGENIC | |
| SBS | Chr7 | 16441314 | T-A | Homo | INTERGENIC | |
| SBS | Chr7 | 22186150 | C-T | Homo | INTERGENIC | |
| SBS | Chr8 | 1770949 | G-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 23729426 | G-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 8514109 | A-G | Hetero | INTERGENIC |
Deletions: 17
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr1 | 361658 | 361670 | 12 | |
| Deletion | Chr2 | 6355953 | 6355958 | 5 | OsKitaake02g086400 |
| Deletion | Chr12 | 7048745 | 7048747 | 2 | |
| Deletion | Chr12 | 7307020 | 7307024 | 4 | |
| Deletion | Chr6 | 11712374 | 11712397 | 23 | |
| Deletion | Chr7 | 12643159 | 12643160 | 1 | OsKitaake07g112600 |
| Deletion | Chr7 | 14736625 | 14736627 | 2 | |
| Deletion | Chr6 | 15032001 | 15040000 | 7999 | |
| Deletion | Chr7 | 16137416 | 16137417 | 1 | |
| Deletion | Chr11 | 19689668 | 19689676 | 8 | |
| Deletion | Chr2 | 20812376 | 20812388 | 12 | |
| Deletion | Chr8 | 24472876 | 24472877 | 1 | OsKitaake08g189700 |
| Deletion | Chr6 | 25941767 | 25941775 | 8 | |
| Deletion | Chr8 | 26824771 | 26824779 | 8 | |
| Deletion | Chr8 | 27257524 | 27257526 | 2 | |
| Deletion | Chr4 | 29519802 | 29519803 | 1 | |
| Deletion | Chr2 | 32929843 | 32929844 | 1 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr1 | 44159912 | 44159919 | 6 | OsKitaake01g493050  |
| Insertion | Chr6 | 5765578 | 5765581 | 2 | |
| Insertion | Chr11 | 7283570 | 7283573 | 2 | |
| Insertion | Chr11 | 9960041 | 9960044 | 2 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr10 | 12469593 | Chr7 | 11298444 | |
| Translocation | Chr10 | 12469609 | Chr7 | 11298272 |