Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN2021-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN2021-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 35
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 2557452 | C-T | Homo | INTERGENIC | |
| SBS | Chr1 | 10798213 | A-C | Hetero | INTRON | |
| SBS | Chr1 | 14752953 | G-C | Hetero | INTERGENIC | |
| SBS | Chr1 | 17050695 | A-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 6874698 | A-G | Homo | INTERGENIC | |
| SBS | Chr2 | 17461276 | C-T | Hetero | SYNONYMOUS_CODING | |
| SBS | Chr2 | 17461277 | A-G | Hetero | NON_SYNONYMOUS_CODING | OsKitaake02g175500 |
| SBS | Chr2 | 31193662 | C-T | Hetero | INTRON | |
| SBS | Chr3 | 13168526 | C-A | Homo | UTR_5_PRIME | |
| SBS | Chr3 | 21337368 | G-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 33478083 | A-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 36675821 | A-C | Homo | INTRON | |
| SBS | Chr4 | 1145652 | A-C | Homo | UTR_5_PRIME | |
| SBS | Chr4 | 22251266 | G-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 29988729 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 31436033 | C-A | Homo | INTERGENIC | |
| SBS | Chr5 | 6849556 | T-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 19762321 | G-C | Homo | INTERGENIC | |
| SBS | Chr5 | 22765204 | C-T | Homo | NON_SYNONYMOUS_CODING | OsKitaake05g187900 |
| SBS | Chr6 | 1768354 | G-T | Homo | INTERGENIC | |
| SBS | Chr6 | 9446286 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 22591736 | C-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 1166877 | C-T | Homo | UTR_5_PRIME | |
| SBS | Chr7 | 10438305 | A-G | Hetero | INTERGENIC | |
| SBS | Chr8 | 6526697 | G-C | Homo | INTERGENIC | |
| SBS | Chr8 | 7075464 | A-G | Homo | INTERGENIC | |
| SBS | Chr8 | 13497709 | T-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 14638595 | C-G | Hetero | INTERGENIC | |
| SBS | Chr11 | 2754864 | C-T | Homo | INTERGENIC | |
| SBS | Chr11 | 3894495 | G-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 26771655 | G-A | Homo | INTERGENIC | |
| SBS | Chr11 | 26771656 | T-A | Homo | INTERGENIC | |
| SBS | Chr11 | 28501860 | G-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 8584263 | C-T | Homo | INTERGENIC | |
| SBS | Chr12 | 17590802 | C-T | Hetero | INTERGENIC |
Deletions: 12
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr7 | 3324794 | 3324795 | 1 | |
| Deletion | Chr6 | 5483579 | 5483587 | 8 | |
| Deletion | Chr3 | 6684510 | 6684512 | 2 | OsKitaake03g094900 |
| Deletion | Chr9 | 12454453 | 12454456 | 3 | |
| Deletion | Chr2 | 15152534 | 15152535 | 1 | |
| Deletion | Chr8 | 17185867 | 17185880 | 13 | |
| Deletion | Chr9 | 17964782 | 17964783 | 1 | OsKitaake09g137201 |
| Deletion | Chr6 | 18775275 | 18775283 | 8 | |
| Deletion | Chr10 | 22961101 | 22961110 | 9 | OsKitaake10g192200 |
| Deletion | Chr6 | 23245001 | 23271000 | 25999 | 3 |
| Deletion | Chr7 | 25910930 | 25910936 | 6 | |
| Deletion | Chr1 | 26588174 | 26588175 | 1 |
Insertions: 5
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr11 | 12122553 | Chr4 | 2760534 | |
| Translocation | Chr11 | 12122564 | Chr4 | 2760344 |