Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN2314 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN2314 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 28
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 2839009 | A-G | Homo | SYNONYMOUS_CODING | |
| SBS | Chr1 | 17710531 | T-C | Hetero | INTERGENIC | |
| SBS | Chr1 | 29523512 | G-A | Homo | INTERGENIC | |
| SBS | Chr1 | 41031833 | C-A | Hetero | INTRON | |
| SBS | Chr1 | 44176608 | A-G | Hetero | INTRON | |
| SBS | Chr2 | 642339 | A-T | Homo | INTERGENIC | |
| SBS | Chr2 | 24164679 | A-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 24859077 | G-C | Hetero | INTERGENIC | |
| SBS | Chr3 | 8600410 | C-A | Homo | INTERGENIC | |
| SBS | Chr3 | 17934778 | C-T | Homo | INTERGENIC | |
| SBS | Chr4 | 4241021 | T-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 17574556 | T-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 35444899 | A-C | Hetero | INTRON | |
| SBS | Chr5 | 23466074 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 17070453 | G-A | Hetero | UTR_3_PRIME | |
| SBS | Chr6 | 21486105 | T-C | Hetero | INTERGENIC | |
| SBS | Chr7 | 13855030 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 19728279 | T-A | Homo | INTERGENIC | |
| SBS | Chr7 | 20790290 | C-G | Homo | INTERGENIC | |
| SBS | Chr7 | 24872657 | G-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 13049681 | G-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 7552494 | C-A | Homo | INTERGENIC | |
| SBS | Chr11 | 23428404 | A-G | Hetero | INTERGENIC | |
| SBS | Chr12 | 991838 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 10713180 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 15326329 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 17391943 | T-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 21021186 | A-G | Hetero | INTERGENIC |
Deletions: 6
Inversions: 6
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr6 | 17542902 | 17882052 | |
| Inversion | Chr11 | 19972482 | 20433090 | 2 |
| Inversion | Chr11 | 19972512 | 20433137 | OsKitaake11g156900 |
| Inversion | Chr6 | 20885187 | 21225023 | |
| Inversion | Chr12 | 23055658 | 23766812 | OsKitaake12g191400 |
| Inversion | Chr12 | 23649818 | 23766810 | OsKitaake12g191400 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr11 | 21986812 | Chr4 | 7321147 | |
| Translocation | Chr5 | 24495441 | Chr3 | 711648 | 2 |