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Mutant Information

Mutant Name	FN2381 [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN2381 Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 43

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 5909887 G-A Hetero INTERGENIC
SBS Chr1 10589009 G-C Hetero INTERGENIC
SBS Chr1 19459119 G-A Hetero INTERGENIC
SBS Chr1 21980311 G-A Hetero INTERGENIC
SBS Chr2 1022512 G-A Hetero INTERGENIC
SBS Chr2 27519313 C-G Hetero INTERGENIC
SBS Chr2 36586202 A-G Hetero INTERGENIC
SBS Chr3 22087588 G-C Hetero INTERGENIC
SBS Chr3 24340981 C-T Homo INTERGENIC
SBS Chr4 10975026 G-A Hetero INTERGENIC
SBS Chr4 11410655 C-T Hetero INTERGENIC
SBS Chr4 33856564 T-G Hetero INTERGENIC
SBS Chr5 8296739 G-A Hetero INTERGENIC
SBS Chr5 9876917 C-T Hetero INTERGENIC
SBS Chr5 9876918 T-A Hetero INTERGENIC
SBS Chr5 12362804 T-C Hetero INTERGENIC
SBS Chr5 16954692 G-T Hetero INTRON
SBS Chr6 24683001 A-G Hetero INTERGENIC
SBS Chr7 845624 G-T Homo INTERGENIC
SBS Chr7 1217075 G-A Hetero INTERGENIC
SBS Chr7 2404942 G-C Hetero INTERGENIC
SBS Chr7 8499845 T-G Hetero INTERGENIC
SBS Chr7 10476451 T-A Hetero INTERGENIC
SBS Chr7 15225387 T-C Hetero INTERGENIC
SBS Chr7 17087738 T-C Hetero INTERGENIC
SBS Chr8 532622 G-A Hetero INTRON
SBS Chr8 17686120 T-C Hetero INTERGENIC
SBS Chr8 24223156 G-T Hetero INTERGENIC
SBS Chr8 24486874 G-T Hetero INTERGENIC
SBS Chr8 24486876 A-T Hetero INTERGENIC
SBS Chr8 24799342 C-G Hetero NON_SYNONYMOUS_CODING OsKitaake08g194000
SBS Chr8 25471475 C-T Hetero INTERGENIC
SBS Chr9 824791 G-A Hetero INTERGENIC
SBS Chr9 1807155 G-T Hetero INTERGENIC
SBS Chr9 2871767 C-A Hetero INTERGENIC
SBS Chr9 11093828 A-G Hetero INTERGENIC
SBS Chr10 3410938 C-T Homo INTERGENIC
SBS Chr10 17953981 A-T Hetero INTRON
SBS Chr10 22740411 G-A Hetero INTERGENIC
SBS Chr11 10791232 A-G Hetero INTERGENIC
SBS Chr12 13235355 C-T Hetero INTERGENIC
SBS Chr12 13235356 A-T Hetero INTERGENIC
SBS Chr12 18935381 G-T Hetero INTERGENIC

Deletions: 18

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr10 167228 167229 1
Deletion Chr4 597511 597513 2
Deletion Chr12 4413340 4413341 1
Deletion Chr12 5306220 5306239 19
Deletion Chr5 9235001 9271000 35999 3
Deletion Chr8 12093586 12093588 2
Deletion Chr6 12292373 12292374 1
Deletion Chr2 13160256 13160268 12
Deletion Chr9 13183294 13183302 8
Deletion Chr12 14215070 14215071 1
Deletion Chr8 16492643 16492649 6
Deletion Chr10 16836158 16836160 2
Deletion Chr6 17179119 17179121 2
Deletion Chr9 18949176 18949180 4
Deletion Chr4 21520510 21520516 6
Deletion Chr7 22195915 22195919 4
Deletion Chr4 34713975 34713977 2
Deletion Chr1 37240351 37240362 11

Insertions: 2

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr6 6770631 6770634 2
Insertion Chr10 18671927 18671931 3

Inversions: 1

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion Chr5 9270198 9875707

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	5909887	G-A	Hetero	INTERGENIC
SBS	Chr1	10589009	G-C	Hetero	INTERGENIC
SBS	Chr1	19459119	G-A	Hetero	INTERGENIC
SBS	Chr1	21980311	G-A	Hetero	INTERGENIC
SBS	Chr2	1022512	G-A	Hetero	INTERGENIC
SBS	Chr2	27519313	C-G	Hetero	INTERGENIC
SBS	Chr2	36586202	A-G	Hetero	INTERGENIC
SBS	Chr3	22087588	G-C	Hetero	INTERGENIC
SBS	Chr3	24340981	C-T	Homo	INTERGENIC
SBS	Chr4	10975026	G-A	Hetero	INTERGENIC
SBS	Chr4	11410655	C-T	Hetero	INTERGENIC
SBS	Chr4	33856564	T-G	Hetero	INTERGENIC
SBS	Chr5	8296739	G-A	Hetero	INTERGENIC
SBS	Chr5	9876917	C-T	Hetero	INTERGENIC
SBS	Chr5	9876918	T-A	Hetero	INTERGENIC
SBS	Chr5	12362804	T-C	Hetero	INTERGENIC
SBS	Chr5	16954692	G-T	Hetero	INTRON
SBS	Chr6	24683001	A-G	Hetero	INTERGENIC
SBS	Chr7	845624	G-T	Homo	INTERGENIC
SBS	Chr7	1217075	G-A	Hetero	INTERGENIC
SBS	Chr7	2404942	G-C	Hetero	INTERGENIC
SBS	Chr7	8499845	T-G	Hetero	INTERGENIC
SBS	Chr7	10476451	T-A	Hetero	INTERGENIC
SBS	Chr7	15225387	T-C	Hetero	INTERGENIC
SBS	Chr7	17087738	T-C	Hetero	INTERGENIC
SBS	Chr8	532622	G-A	Hetero	INTRON
SBS	Chr8	17686120	T-C	Hetero	INTERGENIC
SBS	Chr8	24223156	G-T	Hetero	INTERGENIC
SBS	Chr8	24486874	G-T	Hetero	INTERGENIC
SBS	Chr8	24486876	A-T	Hetero	INTERGENIC
SBS	Chr8	24799342	C-G	Hetero	NON_SYNONYMOUS_CODING	OsKitaake08g194000
SBS	Chr8	25471475	C-T	Hetero	INTERGENIC
SBS	Chr9	824791	G-A	Hetero	INTERGENIC
SBS	Chr9	1807155	G-T	Hetero	INTERGENIC
SBS	Chr9	2871767	C-A	Hetero	INTERGENIC
SBS	Chr9	11093828	A-G	Hetero	INTERGENIC
SBS	Chr10	3410938	C-T	Homo	INTERGENIC
SBS	Chr10	17953981	A-T	Hetero	INTRON
SBS	Chr10	22740411	G-A	Hetero	INTERGENIC
SBS	Chr11	10791232	A-G	Hetero	INTERGENIC
SBS	Chr12	13235355	C-T	Hetero	INTERGENIC
SBS	Chr12	13235356	A-T	Hetero	INTERGENIC
SBS	Chr12	18935381	G-T	Hetero	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr10	167228	167229	1
Deletion	Chr4	597511	597513	2
Deletion	Chr12	4413340	4413341	1
Deletion	Chr12	5306220	5306239	19
Deletion	Chr5	9235001	9271000	35999	3
Deletion	Chr8	12093586	12093588	2
Deletion	Chr6	12292373	12292374	1
Deletion	Chr2	13160256	13160268	12
Deletion	Chr9	13183294	13183302	8
Deletion	Chr12	14215070	14215071	1
Deletion	Chr8	16492643	16492649	6
Deletion	Chr10	16836158	16836160	2
Deletion	Chr6	17179119	17179121	2
Deletion	Chr9	18949176	18949180	4
Deletion	Chr4	21520510	21520516	6
Deletion	Chr7	22195915	22195919	4
Deletion	Chr4	34713975	34713977	2
Deletion	Chr1	37240351	37240362	11

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	9270198	9875707

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Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Position 2

Number of Genes