Search Kitaake

Mutant Information

Mutant Name	FN2582-S [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN2582-S Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 59

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 3162093 G-A Hetero INTERGENIC
SBS Chr1 14760323 C-T Hetero INTERGENIC
SBS Chr1 17527242 T-G Homo INTERGENIC
SBS Chr1 18225618 T-A Hetero INTERGENIC
SBS Chr1 21845113 G-A Homo INTERGENIC
SBS Chr1 22787031 A-G Hetero INTERGENIC
SBS Chr1 29523470 C-T Hetero INTERGENIC
SBS Chr1 31132851 C-T Hetero INTERGENIC
SBS Chr1 38812535 G-T Hetero NON_SYNONYMOUS_CODING OsKitaake01g415700
SBS Chr1 40420309 C-A Hetero INTERGENIC
SBS Chr1 42841889 C-G Hetero INTERGENIC
SBS Chr2 8073009 G-T Hetero INTERGENIC
SBS Chr2 19150950 T-C Hetero INTERGENIC
SBS Chr2 20820068 C-T Hetero INTERGENIC
SBS Chr2 21729306 A-T Hetero INTERGENIC
SBS Chr2 22267634 G-A Hetero INTERGENIC
SBS Chr3 24133229 T-C Hetero INTRON
SBS Chr3 30755828 C-T Hetero INTERGENIC
SBS Chr3 35004230 T-C Hetero UTR_5_PRIME
SBS Chr3 35243723 A-G Hetero NON_SYNONYMOUS_CODING OsKitaake03g385700
SBS Chr4 9569481 C-T Hetero INTERGENIC
SBS Chr4 12976096 T-C Hetero INTERGENIC
SBS Chr4 17775073 C-T Hetero INTERGENIC
SBS Chr4 18184825 C-A Hetero INTERGENIC
SBS Chr5 3533948 A-T Hetero INTERGENIC
SBS Chr5 6858178 T-C Hetero INTERGENIC
SBS Chr5 10591696 G-A Hetero INTRON
SBS Chr5 16732284 C-T Hetero NON_SYNONYMOUS_CODING OsKitaake05g128200
SBS Chr5 21965065 G-T Hetero INTERGENIC
SBS Chr5 29477917 G-T Hetero INTERGENIC
SBS Chr5 30018937 C-G Hetero INTERGENIC
SBS Chr6 12529919 G-C Hetero INTERGENIC
SBS Chr6 15525729 C-T Hetero INTERGENIC
SBS Chr6 15530050 G-A Hetero INTERGENIC
SBS Chr6 17214982 A-G Hetero INTERGENIC
SBS Chr6 20080399 G-A Homo INTERGENIC
SBS Chr7 3631396 T-C Hetero INTERGENIC
SBS Chr7 9565845 T-C Hetero INTERGENIC
SBS Chr8 20738046 C-G Hetero INTERGENIC
SBS Chr9 6130298 G-A Hetero INTERGENIC
SBS Chr9 8586997 G-C Hetero NON_SYNONYMOUS_CODING OsKitaake09g050800
SBS Chr9 10121072 C-T Hetero INTERGENIC
SBS Chr9 16626483 T-C Hetero INTERGENIC
SBS Chr10 873554 A-C Hetero INTRON
SBS Chr10 10564021 C-T Hetero INTERGENIC
SBS Chr10 17603849 G-A Hetero INTERGENIC
SBS Chr10 22867898 T-C Hetero INTERGENIC
SBS Chr11 105145 A-T Hetero INTERGENIC
SBS Chr11 15778312 G-C Hetero INTERGENIC
SBS Chr11 26059338 G-A Hetero INTERGENIC
SBS Chr12 5019540 A-C Homo INTERGENIC
SBS Chr12 6731200 A-G Hetero INTERGENIC
SBS Chr12 9514967 A-C Hetero INTERGENIC
SBS Chr12 12270558 G-T Homo INTERGENIC
SBS Chr12 12450936 G-T Hetero INTERGENIC
SBS Chr12 12867224 T-G Hetero INTERGENIC
SBS Chr12 14715132 C-A Hetero INTERGENIC
SBS Chr12 15815252 G-T Hetero INTERGENIC
SBS Chr12 20572381 A-G Hetero INTERGENIC

Deletions: 3

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr8 8471094 8471114 20
Deletion Chr12 10065001 10077000 11999 OsKitaake12g095200
Deletion Chr2 34931389 34931392 3 OsKitaake02g364400

Insertions: 3

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr4 1530898 1530902 3
Insertion Chr8 24824288 24824292 3
Insertion Chr9 15121259 15121264 4

Inversions: 1

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion Chr12 22344337 22625716

Translocations: 6

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation Chr10 8412492 Chr7 3652194
Translocation Chr9 13034025 Chr8 5098735
Translocation Chr7 19448509 Chr2 10178905 OsKitaake07g157801
Translocation Chr11 24787680 Chr3 32950556 OsKitaake11g201400
Translocation Chr11 25934995 Chr4 34418768 2
Translocation Chr11 25937880 Chr4 34418752 2

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	3162093	G-A	Hetero	INTERGENIC
SBS	Chr1	14760323	C-T	Hetero	INTERGENIC
SBS	Chr1	17527242	T-G	Homo	INTERGENIC
SBS	Chr1	18225618	T-A	Hetero	INTERGENIC
SBS	Chr1	21845113	G-A	Homo	INTERGENIC
SBS	Chr1	22787031	A-G	Hetero	INTERGENIC
SBS	Chr1	29523470	C-T	Hetero	INTERGENIC
SBS	Chr1	31132851	C-T	Hetero	INTERGENIC
SBS	Chr1	38812535	G-T	Hetero	NON_SYNONYMOUS_CODING	OsKitaake01g415700
SBS	Chr1	40420309	C-A	Hetero	INTERGENIC
SBS	Chr1	42841889	C-G	Hetero	INTERGENIC
SBS	Chr2	8073009	G-T	Hetero	INTERGENIC
SBS	Chr2	19150950	T-C	Hetero	INTERGENIC
SBS	Chr2	20820068	C-T	Hetero	INTERGENIC
SBS	Chr2	21729306	A-T	Hetero	INTERGENIC
SBS	Chr2	22267634	G-A	Hetero	INTERGENIC
SBS	Chr3	24133229	T-C	Hetero	INTRON
SBS	Chr3	30755828	C-T	Hetero	INTERGENIC
SBS	Chr3	35004230	T-C	Hetero	UTR_5_PRIME
SBS	Chr3	35243723	A-G	Hetero	NON_SYNONYMOUS_CODING	OsKitaake03g385700
SBS	Chr4	9569481	C-T	Hetero	INTERGENIC
SBS	Chr4	12976096	T-C	Hetero	INTERGENIC
SBS	Chr4	17775073	C-T	Hetero	INTERGENIC
SBS	Chr4	18184825	C-A	Hetero	INTERGENIC
SBS	Chr5	3533948	A-T	Hetero	INTERGENIC
SBS	Chr5	6858178	T-C	Hetero	INTERGENIC
SBS	Chr5	10591696	G-A	Hetero	INTRON
SBS	Chr5	16732284	C-T	Hetero	NON_SYNONYMOUS_CODING	OsKitaake05g128200
SBS	Chr5	21965065	G-T	Hetero	INTERGENIC
SBS	Chr5	29477917	G-T	Hetero	INTERGENIC
SBS	Chr5	30018937	C-G	Hetero	INTERGENIC
SBS	Chr6	12529919	G-C	Hetero	INTERGENIC
SBS	Chr6	15525729	C-T	Hetero	INTERGENIC
SBS	Chr6	15530050	G-A	Hetero	INTERGENIC
SBS	Chr6	17214982	A-G	Hetero	INTERGENIC
SBS	Chr6	20080399	G-A	Homo	INTERGENIC
SBS	Chr7	3631396	T-C	Hetero	INTERGENIC
SBS	Chr7	9565845	T-C	Hetero	INTERGENIC
SBS	Chr8	20738046	C-G	Hetero	INTERGENIC
SBS	Chr9	6130298	G-A	Hetero	INTERGENIC
SBS	Chr9	8586997	G-C	Hetero	NON_SYNONYMOUS_CODING	OsKitaake09g050800
SBS	Chr9	10121072	C-T	Hetero	INTERGENIC
SBS	Chr9	16626483	T-C	Hetero	INTERGENIC
SBS	Chr10	873554	A-C	Hetero	INTRON
SBS	Chr10	10564021	C-T	Hetero	INTERGENIC
SBS	Chr10	17603849	G-A	Hetero	INTERGENIC
SBS	Chr10	22867898	T-C	Hetero	INTERGENIC
SBS	Chr11	105145	A-T	Hetero	INTERGENIC
SBS	Chr11	15778312	G-C	Hetero	INTERGENIC
SBS	Chr11	26059338	G-A	Hetero	INTERGENIC
SBS	Chr12	5019540	A-C	Homo	INTERGENIC
SBS	Chr12	6731200	A-G	Hetero	INTERGENIC
SBS	Chr12	9514967	A-C	Hetero	INTERGENIC
SBS	Chr12	12270558	G-T	Homo	INTERGENIC
SBS	Chr12	12450936	G-T	Hetero	INTERGENIC
SBS	Chr12	12867224	T-G	Hetero	INTERGENIC
SBS	Chr12	14715132	C-A	Hetero	INTERGENIC
SBS	Chr12	15815252	G-T	Hetero	INTERGENIC
SBS	Chr12	20572381	A-G	Hetero	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr8	8471094	8471114	20
Deletion	Chr12	10065001	10077000	11999	OsKitaake12g095200
Deletion	Chr2	34931389	34931392	3	OsKitaake02g364400

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	22344337	22625716

Main menu

You are here

Search Kitaake

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes