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| Mutant Information |
|---|
| Mutant Name | FN2692-S-1 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN2692-S-1 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 17
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 757688 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 32036561 | G-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 37909862 | C-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 42589691 | G-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 29059006 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 1775230 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 18921595 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 37139964 | A-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 3820025 | C-G | Hetero | INTERGENIC | |
| SBS | Chr4 | 21355179 | G-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 25179512 | G-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 21419087 | A-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 1878926 | G-A | Hetero | INTERGENIC | |
| SBS | Chr8 | 16641788 | T-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 4392970 | C-G | Hetero | INTERGENIC | |
| SBS | Chr11 | 26783958 | A-T | Hetero | INTRON | |
| SBS | Chr12 | 8809596 | G-A | Hetero | INTRON |
Deletions: 5
Insertions: 3
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr1 | 13791199 | 13791202 | 2 | |
| Insertion | Chr12 | 12067489 | 12067492 | 2 | |
| Insertion | Chr12 | 25593228 | 25593231 | 2 |
Inversions: 2
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr8 | 452365 | 779643 | OsKitaake08g006600 |
| Inversion | Chr8 | 452367 | 779642 | OsKitaake08g006600 |