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Mutant Information

Mutant Name	FN3182-S [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN3182-S Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 32

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 10522144 T-A Hetero INTERGENIC
SBS Chr1 24935853 C-T Homo INTERGENIC
SBS Chr1 40897114 G-A Hetero INTERGENIC
SBS Chr2 7493333 A-T Hetero INTERGENIC
SBS Chr3 4630439 C-T Hetero INTERGENIC
SBS Chr3 16443733 A-G Homo INTERGENIC
SBS Chr4 1600151 C-A Hetero INTERGENIC
SBS Chr4 8065584 C-T Hetero INTERGENIC
SBS Chr4 8073903 A-T Hetero INTERGENIC
SBS Chr4 8733925 G-A Hetero INTERGENIC
SBS Chr4 10805367 C-T Hetero INTERGENIC
SBS Chr4 14908611 G-A Hetero INTERGENIC
SBS Chr4 17825654 G-A Hetero INTERGENIC
SBS Chr4 22773056 A-T Hetero INTERGENIC
SBS Chr4 22791796 G-A Hetero INTERGENIC
SBS Chr4 28726237 G-T Hetero INTERGENIC
SBS Chr5 20610674 T-A Homo INTERGENIC
SBS Chr5 20916175 C-T Homo INTERGENIC
SBS Chr6 450871 C-T Homo INTERGENIC
SBS Chr6 10115404 C-T Hetero INTRON
SBS Chr8 5786157 G-A Homo INTERGENIC
SBS Chr8 8581098 G-A Homo INTERGENIC
SBS Chr9 3493238 G-A Hetero INTRON
SBS Chr9 5397451 T-A Hetero INTRON
SBS Chr9 5397452 T-A Hetero INTRON
SBS Chr9 21788465 T-C Homo INTERGENIC
SBS Chr10 4613532 A-G Hetero INTERGENIC
SBS Chr11 11288896 C-T Hetero INTERGENIC
SBS Chr11 13021736 G-A Hetero INTERGENIC
SBS Chr11 14291272 T-C Homo INTRON
SBS Chr11 21095637 T-A Homo INTERGENIC
SBS Chr11 28019475 G-A Homo INTERGENIC

Deletions: 8

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr2 10440807 10440808 1
Deletion Chr10 18514576 18514582 6
Deletion Chr5 24142150 24142167 17
Deletion Chr11 25476274 25476276 2
Deletion Chr2 25840697 25840711 14
Deletion Chr11 25911464 25911466 2
Deletion Chr2 35986668 35986675 7
Deletion Chr1 40621256 40621258 2

Insertions: 1

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr2 6852886 6852896 9

Translocations: 2

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation Chr11 12086512 Chr2 27749505 2
Translocation Chr11 12094920 Chr2 19026521 OsKitaake11g112000

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10522144	T-A	Hetero	INTERGENIC
SBS	Chr1	24935853	C-T	Homo	INTERGENIC
SBS	Chr1	40897114	G-A	Hetero	INTERGENIC
SBS	Chr2	7493333	A-T	Hetero	INTERGENIC
SBS	Chr3	4630439	C-T	Hetero	INTERGENIC
SBS	Chr3	16443733	A-G	Homo	INTERGENIC
SBS	Chr4	1600151	C-A	Hetero	INTERGENIC
SBS	Chr4	8065584	C-T	Hetero	INTERGENIC
SBS	Chr4	8073903	A-T	Hetero	INTERGENIC
SBS	Chr4	8733925	G-A	Hetero	INTERGENIC
SBS	Chr4	10805367	C-T	Hetero	INTERGENIC
SBS	Chr4	14908611	G-A	Hetero	INTERGENIC
SBS	Chr4	17825654	G-A	Hetero	INTERGENIC
SBS	Chr4	22773056	A-T	Hetero	INTERGENIC
SBS	Chr4	22791796	G-A	Hetero	INTERGENIC
SBS	Chr4	28726237	G-T	Hetero	INTERGENIC
SBS	Chr5	20610674	T-A	Homo	INTERGENIC
SBS	Chr5	20916175	C-T	Homo	INTERGENIC
SBS	Chr6	450871	C-T	Homo	INTERGENIC
SBS	Chr6	10115404	C-T	Hetero	INTRON
SBS	Chr8	5786157	G-A	Homo	INTERGENIC
SBS	Chr8	8581098	G-A	Homo	INTERGENIC
SBS	Chr9	3493238	G-A	Hetero	INTRON
SBS	Chr9	5397451	T-A	Hetero	INTRON
SBS	Chr9	5397452	T-A	Hetero	INTRON
SBS	Chr9	21788465	T-C	Homo	INTERGENIC
SBS	Chr10	4613532	A-G	Hetero	INTERGENIC
SBS	Chr11	11288896	C-T	Hetero	INTERGENIC
SBS	Chr11	13021736	G-A	Hetero	INTERGENIC
SBS	Chr11	14291272	T-C	Homo	INTRON
SBS	Chr11	21095637	T-A	Homo	INTERGENIC
SBS	Chr11	28019475	G-A	Homo	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr2	10440807	10440808	1
Deletion	Chr10	18514576	18514582	6
Deletion	Chr5	24142150	24142167	17
Deletion	Chr11	25476274	25476276	2
Deletion	Chr2	25840697	25840711	14
Deletion	Chr11	25911464	25911466	2
Deletion	Chr2	35986668	35986675	7
Deletion	Chr1	40621256	40621258	2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	12086512	Chr2	27749505	2
Translocation	Chr11	12094920	Chr2	19026521	OsKitaake11g112000

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Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes