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| Mutant Information |
|---|
| Mutant Name | FN3469-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN3469-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 17
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 25495875 | C-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 10189269 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 20454326 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 2782403 | G-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 2782404 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 7393139 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 16184602 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 19726341 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 33971932 | G-T | Hetero | UTR_3_PRIME | |
| SBS | Chr5 | 20906894 | G-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 22670817 | G-A | Homo | INTERGENIC | |
| SBS | Chr6 | 28497814 | C-T | Homo | INTERGENIC | |
| SBS | Chr7 | 20944121 | C-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 264152 | G-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 23749095 | A-T | Homo | NON_SYNONYMOUS_CODING | OsKitaake10g203700 |
| SBS | Chr11 | 15293408 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 19884040 | A-C | Hetero | INTERGENIC |
Deletions: 9
Insertions: 1
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr4 | 27705770 | 27705773 | 2 |
Inversions: 1
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr2 | 30918426 | 30925767 |