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| Mutant Information |
|---|
| Mutant Name | FN351-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN351-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 32
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 6933412 | A-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 38564656 | T-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 38564657 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 42339541 | C-T | Homo | INTERGENIC | |
| SBS | Chr1 | 42339542 | C-T | Homo | INTERGENIC | |
| SBS | Chr2 | 23277332 | G-A | Homo | INTERGENIC | |
| SBS | Chr3 | 11885132 | A-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 11885133 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 14593262 | A-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 15445265 | A-C | Hetero | INTERGENIC | |
| SBS | Chr3 | 15445267 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 15956324 | G-T | Hetero | INTRON | |
| SBS | Chr3 | 15998666 | G-T | Hetero | INTRON | |
| SBS | Chr3 | 19225977 | T-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 19225978 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 31297549 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 7562290 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 17934362 | C-T | Hetero | INTERGENIC | |
| SBS | Chr5 | 3189408 | A-G | Hetero | INTERGENIC | |
| SBS | Chr5 | 5791211 | G-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 8670534 | C-T | Homo | INTERGENIC | |
| SBS | Chr8 | 21795939 | C-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 4239084 | T-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 11874387 | G-T | Homo | INTERGENIC | |
| SBS | Chr10 | 4930212 | T-C | Hetero | INTERGENIC | |
| SBS | Chr10 | 4973793 | G-C | Hetero | INTERGENIC | |
| SBS | Chr10 | 16080088 | T-G | Hetero | INTERGENIC | |
| SBS | Chr10 | 21589038 | G-A | Homo | INTERGENIC | |
| SBS | Chr11 | 3773204 | G-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 10183596 | A-G | Homo | INTERGENIC | |
| SBS | Chr12 | 2954000 | T-G | Homo | INTERGENIC | |
| SBS | Chr12 | 2954001 | G-T | Homo | INTERGENIC |
Deletions: 8
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr3 | 52182 | 52184 | 2 | |
| Deletion | Chr4 | 791709 | 791720 | 11 | |
| Deletion | Chr6 | 3024981 | 3024982 | 1 | |
| Deletion | Chr8 | 9482001 | 9509000 | 26999 | |
| Deletion | Chr9 | 15617959 | 15617965 | 6 | OsKitaake09g110300 |
| Deletion | Chr7 | 26080246 | 26080247 | 1 | |
| Deletion | Chr3 | 33111001 | 33255000 | 143999 | 18 |
| Deletion | Chr2 | 33330001 | 33343000 | 12999 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr4 | 25084087 | 25084090 | 2 | |
| Insertion | Chr10 | 11583294 | 11583297 | 2 | |
| Insertion | Chr1 | 17265140 | 17265142 | 1 | |
| Insertion | Chr12 | 15941367 | 15941369 | 1 |
Inversions: 2
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr12 | 6359389 | 7325673 | OsKitaake12g080800 |
| Inversion | Chr12 | 6359414 | 7325688 | OsKitaake12g080800 |