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Mutant Information 

Mutant NameFN4150-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4150-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 56

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr111630734A-GHomoINTERGENIC
SBS  Chr117891675C-THeteroINTERGENIC
SBS  Chr135029776C-THeteroINTERGENIC
SBS  Chr21273078C-THomoINTERGENIC
SBS  Chr215590718T-CHomoINTRON
SBS  Chr215881291C-THeteroINTRON
SBS  Chr221087053A-GHomoSYNONYMOUS_CODING
SBS  Chr3775702T-GHeteroINTERGENIC
SBS  Chr31242093G-AHeteroINTERGENIC
SBS  Chr38430252G-CHomoINTERGENIC
SBS  Chr310641168T-AHeteroINTERGENIC
SBS  Chr318348772C-THeteroINTERGENIC
SBS  Chr332879682G-AHomoUTR_3_PRIME
SBS  Chr44410427G-AHomoINTERGENIC
SBS  Chr47772567C-THeteroINTERGENIC
SBS  Chr47772568C-THeteroINTERGENIC
SBS  Chr5782271G-AHeteroINTERGENIC
SBS  Chr512452100G-AHeteroINTERGENIC
SBS  Chr518035764C-AHeteroINTERGENIC
SBS  Chr611781032C-AHeteroINTERGENIC
SBS  Chr611781034T-AHeteroINTERGENIC
SBS  Chr612138179C-GHeteroINTERGENIC
SBS  Chr616434306A-THeteroINTERGENIC
SBS  Chr617461826C-THomoINTERGENIC
SBS  Chr74462666T-CHomoINTRON
SBS  Chr77958678C-THeteroINTERGENIC
SBS  Chr77958680G-THeteroINTERGENIC
SBS  Chr78530499C-THeteroINTERGENIC
SBS  Chr710134025C-THeteroINTERGENIC
SBS  Chr711883077C-AHeteroINTERGENIC
SBS  Chr712365178G-CHeteroINTERGENIC
SBS  Chr713916803G-THeteroINTERGENIC
SBS  Chr82198556G-THeteroINTERGENIC
SBS  Chr810660505G-AHeteroINTERGENIC
SBS  Chr820054991G-AHeteroINTERGENIC
SBS  Chr827475985G-AHeteroINTERGENIC
SBS  Chr91136640G-CHomoINTERGENIC
SBS  Chr92871767C-AHomoINTERGENIC
SBS  Chr95394238A-THomoINTRON
SBS  Chr95394686A-THomoINTRON
SBS  Chr917047088T-CHomoSYNONYMOUS_CODING
SBS  Chr101621343A-THeteroINTERGENIC
SBS  Chr1013307669G-AHeteroINTERGENIC
SBS  Chr1015728220G-AHeteroINTERGENIC
SBS  Chr1110708078C-GHeteroINTERGENIC
SBS  Chr1112848045A-THeteroINTERGENIC
SBS  Chr1113455219G-AHeteroINTERGENIC
SBS  Chr1113581641A-GHeteroINTERGENIC
SBS  Chr1119621953T-AHomoINTERGENIC
SBS  Chr1120064543A-GHomoINTERGENIC
SBS  Chr1122710213G-THomoINTRON
SBS  Chr121420411C-THeteroINTERGENIC
SBS  Chr122210679G-AHeteroINTERGENIC
SBS  Chr124509404A-THeteroINTERGENIC
SBS  Chr1222606592G-AHeteroINTERGENIC
SBS  Chr1224149882T-GHomoINTERGENIC

Deletions: 23

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr11247873124788512
Deletion  Chr1015600011601000409995
Deletion  Chr10195810419581095
Deletion  Chr12202734920273545
Deletion  Chr32032806203282317
Deletion  Chr12209126620912726
Deletion  Chr5218762221876231OsKitaake05g024700
Deletion  Chr7221419722141981
Deletion  Chr1026470012669000219995
Deletion  Chr39331054933107016OsKitaake03g126800
Deletion  Chr129806502980651311
Deletion  Chr411368617113686181
Deletion  Chr2114571661145718317
Deletion  Chr10133088001330881111
Deletion  Chr415254159152541645
Deletion  Chr816396339163963401
Deletion  Chr418240869182408734
Deletion  Chr218458606184586082OsKitaake02g183000
Deletion  Chr619943052199430553
Deletion  Chr622282460222824655
Deletion  Chr728748956287489571OsKitaake07g274300
Deletion  Chr330683043306830441
Deletion  Chr435841611358416176

Insertions: 4

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr4182565918256622
Insertion  Chr520142344201423472
Insertion  Chr720394494203944972
Insertion  Chr824752105247521082OsKitaake08g193300 image

Inversions: 4

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion  Chr257447666204552
Inversion  Chr961556286422997
Inversion  Chr961556386423003
Inversion  Chr262045566513627

Translocations: 2

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation  Chr825710728Chr314414144OsKitaake08g203700
Translocation  Chr825711045Chr314414153OsKitaake08g203700