Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN4176-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4176-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 32
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 7149217 | G-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 11077188 | C-T | Hetero | NON_SYNONYMOUS_CODING | OsKitaake02g129400 |
| SBS | Chr2 | 11476635 | C-T | Homo | INTERGENIC | |
| SBS | Chr2 | 23299166 | T-G | Hetero | INTERGENIC | |
| SBS | Chr3 | 1928613 | C-A | Hetero | NON_SYNONYMOUS_CODING | OsKitaake03g027600 |
| SBS | Chr3 | 3745389 | A-G | Homo | INTERGENIC | |
| SBS | Chr4 | 2175050 | A-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 9863291 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 16631818 | A-C | Homo | INTERGENIC | |
| SBS | Chr4 | 17796268 | T-A | Homo | INTERGENIC | |
| SBS | Chr4 | 18086496 | C-A | Homo | INTERGENIC | |
| SBS | Chr4 | 18086497 | C-A | Homo | INTERGENIC | |
| SBS | Chr4 | 20051419 | C-T | Homo | INTRON | |
| SBS | Chr5 | 13435569 | T-A | Homo | UTR_3_PRIME | |
| SBS | Chr5 | 20421967 | T-A | Homo | INTERGENIC | |
| SBS | Chr5 | 26436003 | T-A | Homo | INTERGENIC | |
| SBS | Chr6 | 1459476 | G-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 20059146 | G-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 21067697 | T-C | Hetero | INTERGENIC | |
| SBS | Chr6 | 25377354 | G-A | Homo | INTERGENIC | |
| SBS | Chr7 | 2019855 | G-T | Hetero | INTERGENIC | |
| SBS | Chr7 | 18625661 | G-T | Hetero | INTERGENIC | |
| SBS | Chr7 | 23718353 | G-A | Homo | INTERGENIC | |
| SBS | Chr8 | 13543989 | G-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 15800616 | A-G | Hetero | INTERGENIC | |
| SBS | Chr8 | 22811362 | A-T | Hetero | INTERGENIC | |
| SBS | Chr9 | 9193678 | C-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 23405873 | C-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 3851161 | T-C | Homo | INTERGENIC | |
| SBS | Chr11 | 7143845 | T-A | Homo | INTERGENIC | |
| SBS | Chr11 | 13983494 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 2731406 | G-A | Hetero | INTERGENIC |
Deletions: 7
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr2 | 1816206 | 1816219 | 13 | |
| Deletion | Chr3 | 3899001 | 3909000 | 9999 | OsKitaake03g055800 |
| Deletion | Chr11 | 4996602 | 4996610 | 8 | |
| Deletion | Chr4 | 9793333 | 9793338 | 5 | |
| Deletion | Chr7 | 15689191 | 15689193 | 2 | |
| Deletion | Chr5 | 16810826 | 16810830 | 4 | |
| Deletion | Chr1 | 39491652 | 39491653 | 1 |
Insertions: 2
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr1 | 44213717 | 44213721 | 3 | |
| Insertion | Chr6 | 21477894 | 21477897 | 2 |
Inversions: 1
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr4 | 13443590 | 13942600 |
Translocations: 1
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr8 | 14351982 | Chr4 | 13443589 |