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| Mutant Information |
|---|
| Mutant Name | FN431-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN431-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 26
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 13800595 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 31994365 | T-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 14077447 | G-A | Hetero | INTERGENIC | |
| SBS | Chr3 | 25915652 | G-T | Homo | INTERGENIC | |
| SBS | Chr3 | 26194599 | G-A | Homo | INTERGENIC | |
| SBS | Chr5 | 6907014 | T-C | Hetero | UTR_3_PRIME | |
| SBS | Chr5 | 12863276 | G-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 23458707 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 12441141 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 18702923 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 20232442 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 6233756 | C-G | Homo | INTERGENIC | |
| SBS | Chr7 | 6320471 | C-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 6320472 | C-T | Hetero | INTERGENIC | |
| SBS | Chr7 | 6320473 | T-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 7745150 | T-C | Hetero | INTERGENIC | |
| SBS | Chr10 | 4522545 | G-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 12951006 | C-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 15101846 | G-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 16013514 | G-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 19605839 | A-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 20952746 | G-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 13049506 | C-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 23048961 | C-G | Homo | INTERGENIC | |
| SBS | Chr12 | 14885325 | G-A | Homo | UTR_5_PRIME | |
| SBS | Chr12 | 27055543 | G-A | Homo | INTERGENIC |
Deletions: 10
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr7 | 851001 | 963000 | 111999 | 17 |
| Deletion | Chr8 | 3820085 | 3820102 | 17 | |
| Deletion | Chr5 | 5845457 | 5845459 | 2 | |
| Deletion | Chr2 | 10155284 | 10155285 | 1 | OsKitaake02g121901 |
| Deletion | Chr4 | 13825001 | 13836000 | 10999 | OsKitaake04g066300 |
| Deletion | Chr10 | 13928011 | 13928013 | 2 | |
| Deletion | Chr9 | 19286779 | 19286781 | 2 | OsKitaake09g156200 |
| Deletion | Chr1 | 19848593 | 19848605 | 12 | |
| Deletion | Chr9 | 20124389 | 20124393 | 4 | |
| Deletion | Chr3 | 36802409 | 36802418 | 9 | OsKitaake03g410700 |
Insertions: 1
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr6 | 29376172 | 29376174 | 1 |
Inversions: 5
Translocations: 5
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr7 | 915931 | Chr4 | 17660603 | OsKitaake04g088350 |
| Translocation | Chr5 | 2067009 | Chr3 | 3251761 | |
| Translocation | Chr6 | 3946445 | Chr2 | 35425500 | 2 |
| Translocation | Chr10 | 15777332 | Chr6 | 6447203 | |
| Translocation | Chr12 | 22221086 | Chr1 | 30482509 |