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| Mutant Information |
|---|
| Mutant Name | FN432-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN432-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 36
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 9353991 | G-A | Hetero | INTRON | |
| SBS | Chr1 | 16113507 | T-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 18969250 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 30337034 | G-A | Homo | INTERGENIC | |
| SBS | Chr1 | 35796728 | G-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 6674102 | T-C | Homo | INTERGENIC | |
| SBS | Chr2 | 9285152 | C-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 33462782 | A-C | Homo | INTERGENIC | |
| SBS | Chr3 | 3818098 | A-G | Hetero | INTERGENIC | |
| SBS | Chr3 | 29368675 | G-T | Homo | INTRON | |
| SBS | Chr3 | 34195643 | G-C | Homo | INTERGENIC | |
| SBS | Chr4 | 11562407 | G-A | Homo | INTERGENIC | |
| SBS | Chr5 | 3848813 | C-T | Homo | INTERGENIC | |
| SBS | Chr5 | 7497637 | T-G | Homo | INTRON | |
| SBS | Chr5 | 23545524 | G-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 23780141 | G-C | Hetero | NON_SYNONYMOUS_CODING | OsKitaake05g208600 |
| SBS | Chr6 | 4549192 | G-C | Hetero | INTERGENIC | |
| SBS | Chr6 | 16691249 | T-A | Homo | INTERGENIC | |
| SBS | Chr7 | 25516432 | C-G | Hetero | INTERGENIC | |
| SBS | Chr8 | 3835288 | C-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 18224338 | G-A | Homo | INTERGENIC | |
| SBS | Chr8 | 18224339 | G-T | Homo | INTERGENIC | |
| SBS | Chr9 | 1920286 | T-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 4017730 | C-G | Homo | INTERGENIC | |
| SBS | Chr9 | 13457383 | C-T | Homo | INTERGENIC | |
| SBS | Chr9 | 18361624 | A-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 21212189 | C-G | Hetero | INTERGENIC | |
| SBS | Chr10 | 10655577 | G-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 1168109 | G-C | Hetero | INTERGENIC | |
| SBS | Chr11 | 8176853 | T-A | Hetero | INTRON | |
| SBS | Chr11 | 14044423 | T-C | Hetero | UTR_3_PRIME | |
| SBS | Chr11 | 20151553 | C-T | Hetero | INTRON | |
| SBS | Chr12 | 8390561 | C-T | Hetero | SYNONYMOUS_CODING | |
| SBS | Chr12 | 16366788 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 16990738 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 18437839 | T-G | Hetero | INTERGENIC |
Deletions: 14
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr3 | 409104 | 409106 | 2 | |
| Deletion | Chr10 | 1528700 | 1528702 | 2 | |
| Deletion | Chr10 | 4355595 | 4355608 | 13 | |
| Deletion | Chr6 | 4535467 | 4535468 | 1 | OsKitaake06g062600 |
| Deletion | Chr8 | 7591236 | 7591237 | 1 | |
| Deletion | Chr8 | 9210411 | 9210422 | 11 | |
| Deletion | Chr5 | 10538305 | 10538321 | 16 | |
| Deletion | Chr6 | 10636524 | 10636624 | 100 | OsKitaake06g119501 |
| Deletion | Chr9 | 12123001 | 12168000 | 44999 | 4 |
| Deletion | Chr9 | 14712001 | 14743000 | 30999 | 2 |
| Deletion | Chr6 | 16786828 | 16786829 | 1 | OsKitaake06g158400 |
| Deletion | Chr3 | 18494001 | 19044000 | 549999 | 40 |
| Deletion | Chr3 | 19064096 | 19064098 | 2 | |
| Deletion | Chr8 | 28506548 | 28506550 | 2 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr1 | 42379499 | 42379501 | 1 | |
| Insertion | Chr3 | 36082270 | 36082273 | 2 | |
| Insertion | Chr5 | 26912875 | 26912878 | 2 | |
| Insertion | Chr6 | 446 | 448 | 1 |