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| Mutant Information |
|---|
| Mutant Name | FN435-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN435-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 22
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 10261229 | A-G | Homo | INTERGENIC | |
| SBS | Chr1 | 19197478 | C-T | Homo | INTERGENIC | |
| SBS | Chr2 | 23931218 | C-G | Hetero | INTRON | |
| SBS | Chr2 | 24662292 | G-A | Hetero | SYNONYMOUS_CODING | |
| SBS | Chr3 | 31386352 | C-T | Hetero | INTRON | |
| SBS | Chr3 | 35180515 | G-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 15633663 | C-T | Homo | INTERGENIC | |
| SBS | Chr5 | 3234900 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 6073752 | C-T | Hetero | NON_SYNONYMOUS_CODING | OsKitaake06g080000 |
| SBS | Chr6 | 6273622 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 12556825 | T-C | Hetero | INTERGENIC | |
| SBS | Chr6 | 29636478 | G-T | Homo | INTERGENIC | |
| SBS | Chr7 | 14550930 | G-A | Homo | INTERGENIC | |
| SBS | Chr8 | 5777003 | T-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 4331319 | T-C | Homo | INTERGENIC | |
| SBS | Chr9 | 12388883 | G-A | Homo | INTRON | |
| SBS | Chr9 | 12388884 | C-A | Homo | INTRON | |
| SBS | Chr9 | 15829616 | A-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 4649498 | T-G | Hetero | INTERGENIC | |
| SBS | Chr11 | 6745985 | A-G | Hetero | INTERGENIC | |
| SBS | Chr12 | 18905635 | C-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 24238776 | C-G | Homo | INTERGENIC |
Deletions: 6
Insertions: 1
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr2 | 35360528 | 35360531 | 2 |
Translocations: 1
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr12 | 5084034 | Chr3 | 24787124 |