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| Mutant Information |
|---|
| Mutant Name | FN4361-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4361-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 48
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 3413274 | T-C | HET | ||
| SBS | Chr1 | 5082335 | T-C | HET | ||
| SBS | Chr1 | 5632691 | G-A | HET | ||
| SBS | Chr1 | 22473948 | A-C | HET | ||
| SBS | Chr1 | 24553692 | T-A | HET | ||
| SBS | Chr1 | 40695937 | C-T | HET | ||
| SBS | Chr2 | 8461542 | T-C | HET | ||
| SBS | Chr2 | 21379680 | A-G | HET | ||
| SBS | Chr2 | 31497916 | A-T | HOMO | ||
| SBS | Chr3 | 2711131 | C-T | HOMO | ||
| SBS | Chr3 | 20844595 | A-G | HET | ||
| SBS | Chr3 | 31476696 | G-T | HET | ||
| SBS | Chr3 | 33995236 | T-C | HET | ||
| SBS | Chr3 | 35436166 | G-A | HET | ||
| SBS | Chr4 | 2794311 | A-C | HET | ||
| SBS | Chr4 | 11460640 | C-A | HOMO | ||
| SBS | Chr4 | 21337934 | C-G | HET | ||
| SBS | Chr4 | 34337713 | T-C | HET | ||
| SBS | Chr5 | 489454 | A-G | HET | ||
| SBS | Chr5 | 6014503 | A-T | HET | ||
| SBS | Chr5 | 20615878 | A-T | HET | ||
| SBS | Chr6 | 8169893 | G-T | HET | ||
| SBS | Chr6 | 13344814 | G-A | HET | ||
| SBS | Chr6 | 15347347 | A-G | HET | ||
| SBS | Chr6 | 29279283 | A-T | HOMO | ||
| SBS | Chr7 | 724449 | C-A | HET | ||
| SBS | Chr7 | 1136746 | A-G | HOMO | ||
| SBS | Chr7 | 14420850 | A-C | HET | ||
| SBS | Chr8 | 7634235 | A-T | HET | ||
| SBS | Chr8 | 9539432 | C-T | HET | ||
| SBS | Chr8 | 12845589 | G-A | HET | ||
| SBS | Chr8 | 15662353 | G-T | HET | ||
| SBS | Chr8 | 16064969 | G-A | HET | ||
| SBS | Chr9 | 2894641 | C-A | HOMO | ||
| SBS | Chr9 | 4084998 | G-A | HOMO | ||
| SBS | Chr9 | 12088174 | G-A | HOMO | ||
| SBS | Chr9 | 12088175 | C-T | HOMO | ||
| SBS | Chr10 | 9406469 | C-T | HOMO | ||
| SBS | Chr10 | 12281315 | C-T | HET | ||
| SBS | Chr11 | 2998624 | T-C | HET | OsKitaake11g042300 | |
| SBS | Chr11 | 6608738 | A-G | HET | ||
| SBS | Chr11 | 10875250 | T-C | HOMO | ||
| SBS | Chr11 | 18494165 | T-C | HOMO | ||
| SBS | Chr11 | 20498177 | A-G | HET | ||
| SBS | Chr11 | 27577188 | G-A | HET | ||
| SBS | Chr12 | 1978630 | T-C | HOMO | ||
| SBS | Chr12 | 9611462 | G-T | HOMO | ||
| SBS | Chr12 | 18837487 | C-T | HET |
Deletions: 15
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr12 | 504815 | 504821 | 7 | |
| Deletion | Chr12 | 1473125 | 1473132 | 8 | |
| Deletion | Chr6 | 3398464 | 3398492 | 29 | |
| Deletion | Chr4 | 10051454 | 10051461 | 8 | |
| Deletion | Chr2 | 11022253 | 11022255 | 3 | |
| Deletion | Chr7 | 12289577 | 12289578 | 2 | |
| Deletion | Chr5 | 15297715 | 15297715 | 1 | |
| Deletion | Chr2 | 20621044 | 20621051 | 8 | |
| Deletion | Chr12 | 22619305 | 22619310 | 6 | OsKitaake12g177900 |
| Deletion | Chr1 | 26804641 | 26804641 | 1 | OsKitaake01g260400 |
| Deletion | Chr3 | 28761517 | 28761522 | 6 | |
| Deletion | Chr5 | 29372170 | 29372170 | 1 | |
| Deletion | Chr2 | 30332644 | 30332651 | 8 | |
| Deletion | Chr1 | 39171524 | 39171525 | 2 | |
| Deletion | Chr1 | 41346756 | 41346757 | 2 |
Insertions: 8