Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN4386-2-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4386-2-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 33
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 17280856 | G-T | HOMO | ||
| SBS | Chr1 | 40336531 | A-T | HET | ||
| SBS | Chr2 | 18988375 | G-A | HET | ||
| SBS | Chr3 | 5552687 | T-A | HET | ||
| SBS | Chr3 | 18350041 | A-G | HOMO | ||
| SBS | Chr3 | 36422752 | C-T | HET | ||
| SBS | Chr4 | 13854950 | C-G | HET | ||
| SBS | Chr5 | 3988138 | A-G | HET | OsKitaake05g048100 | |
| SBS | Chr5 | 6223278 | G-A | HET | ||
| SBS | Chr5 | 9618246 | A-T | HET | ||
| SBS | Chr6 | 18176023 | G-C | HOMO | ||
| SBS | Chr7 | 2906281 | G-T | HET | ||
| SBS | Chr7 | 7565661 | T-A | HET | ||
| SBS | Chr7 | 10436657 | C-T | HET | ||
| SBS | Chr7 | 14601415 | C-A | HET | ||
| SBS | Chr8 | 20615424 | T-G | HET | ||
| SBS | Chr8 | 23951932 | A-G | HET | ||
| SBS | Chr8 | 28519858 | G-A | HOMO | ||
| SBS | Chr10 | 2561301 | G-C | HET | ||
| SBS | Chr10 | 10568322 | G-T | HET | ||
| SBS | Chr10 | 20065628 | A-T | HOMO | ||
| SBS | Chr11 | 12761837 | T-G | HET | ||
| SBS | Chr11 | 13650181 | C-T | HET | ||
| SBS | Chr11 | 15621755 | T-G | HET | OsKitaake11g125600 | |
| SBS | Chr11 | 15643416 | A-G | HET | ||
| SBS | Chr11 | 15680135 | A-G | HET | ||
| SBS | Chr11 | 16279183 | A-G | HET | ||
| SBS | Chr11 | 16355266 | C-A | HET | ||
| SBS | Chr12 | 721503 | T-C | HET | ||
| SBS | Chr12 | 721510 | G-A | HET | ||
| SBS | Chr12 | 3877283 | C-A | HET | ||
| SBS | Chr12 | 19040188 | G-A | HET | ||
| SBS | Chr12 | 22357686 | C-A | HET |
Deletions: 20
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr10 | 1250513 | 1250521 | 9 | |
| Deletion | Chr8 | 5621039 | 5621039 | 1 | |
| Deletion | Chr6 | 7489307 | 7489307 | 1 | |
| Deletion | Chr12 | 7885001 | 7965000 | 80000 | OsKitaake12g084500 |
| Deletion | Chr12 | 9057067 | 9057068 | 2 | |
| Deletion | Chr7 | 10048001 | 10164000 | 116000 | 9 |
| Deletion | Chr1 | 11142789 | 11142789 | 1 | 2 |
| Deletion | Chr7 | 11922710 | 11922717 | 8 | |
| Deletion | Chr1 | 11998982 | 11999003 | 22 | |
| Deletion | Chr1 | 12589430 | 12589432 | 3 | |
| Deletion | Chr6 | 13301019 | 13301019 | 1 | |
| Deletion | Chr6 | 13625871 | 13625960 | 90 | |
| Deletion | Chr12 | 19401800 | 19401891 | 92 | |
| Deletion | Chr10 | 21221933 | 21221945 | 13 | |
| Deletion | Chr2 | 21568005 | 21568006 | 2 | |
| Deletion | Chr8 | 22725857 | 22725857 | 1 | |
| Deletion | Chr1 | 22852160 | 22852167 | 8 | |
| Deletion | Chr1 | 24458449 | 24458453 | 5 | |
| Deletion | Chr2 | 26622903 | 26622912 | 10 | |
| Deletion | Chr4 | 31606536 | 31606539 | 4 |
Insertions: 7
Inversions: 1
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr5 | 3162187 | 3297910 |
Translocations: 1
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr10 | 19229756 | Chr7 | 28315383 |