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Mutant Information 

Mutant NameFN4427-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4427-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 3

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected
SBS  Chr220715456T-AHET
SBS  Chr814053673G-AHET
SBS  Chr1113773885T-AHET

Deletions: 9

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes
Deletion  Chr65027475027471
Deletion  Chr7254499925449991
Deletion  Chr9273697727369771
Deletion  Chr5867071786707182
Deletion  Chr6936187593618751
Deletion  Chr713721001137300009000
Deletion  Chr818331077183310771
Deletion  Chr826256541262565411
Deletion  Chr530266746302667461

Insertions: 14

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes
Insertion  Chr218484911184849131
Insertion  Chr236250235362502371
Insertion  Chr330790035307900371
Insertion  Chr4322518332251851
Insertion  Chr5995353499535372
Insertion  Chr511704516117045181
Insertion  Chr64572614572631
Insertion  Chr6228610622861081
Insertion  Chr629252329292523311
Insertion  Chr819062050190620521
Insertion  Chr1012991050129910532
Insertion  Chr1023168115231681171
Insertion  Chr1117118254171182561
Insertion  Chr1211681839116818411

Inversions: 4

Variant Type

Chromosome

Position 1

Position 2

Number of Genes
Inversion  Chr12496522624965458
Inversion  Chr12565434725654453
Inversion  Chr42972419829724364OsKitaake04g228300
Inversion  Chr13632456836324694OsKitaake01g385400