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Mutant Information 

Mutant NameFN4458-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4458-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 51

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr17214841T-AHOMO
SBS  Chr17214842C-AHOMO
SBS  Chr125836901C-THET
SBS  Chr134504216C-THET
SBS  Chr22415455G-THOMO
SBS  Chr26269857A-GHET
SBS  Chr26269858T-CHET
SBS  Chr29882123G-AHET
SBS  Chr232087916C-GHETOsKitaake02g327900
SBS  Chr233785535C-GHET
SBS  Chr36690449A-GHOMO
SBS  Chr315903344A-THOMO
SBS  Chr315903345G-THOMO
SBS  Chr326799537C-THET
SBS  Chr416234559A-GHOMO
SBS  Chr417638593G-AHOMO
SBS  Chr417858727C-THOMO
SBS  Chr422673232C-AHET
SBS  Chr428180839A-THOMO
SBS  Chr436686399G-AHOMOOsKitaake04g319300
SBS  Chr436686402C-AHOMOOsKitaake04g319300
SBS  Chr436841285C-THET
SBS  Chr5508730C-THOMO
SBS  Chr51762838C-AHET
SBS  Chr510338515A-GHET
SBS  Chr512404928T-CHET
SBS  Chr512907254G-CHET
SBS  Chr520494335G-AHET
SBS  Chr520494338A-GHET
SBS  Chr619432276C-THET
SBS  Chr621325426A-GHOMO
SBS  Chr622632692C-THET
SBS  Chr625859450C-AHET
SBS  Chr75433664C-THETOsKitaake07g066200
SBS  Chr710521964A-CHET
SBS  Chr711670892T-CHET
SBS  Chr729209550A-THETOsKitaake07g280100
SBS  Chr85242156A-THET
SBS  Chr819090782C-THET
SBS  Chr819766526G-AHET
SBS  Chr823378400G-AHET
SBS  Chr826269941G-AHET
SBS  Chr828856688G-AHOMO
SBS  Chr828856692C-AHOMO
SBS  Chr9467411C-THET
SBS  Chr94033228C-AHET
SBS  Chr1014764930C-THET
SBS  Chr1114695540T-CHOMO
SBS  Chr1123734047G-THOMO
SBS  Chr128460881G-AHET
SBS  Chr1214197757A-GHET

Deletions: 21

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr3160797416079741
Deletion  Chr11307206330720631
Deletion  Chr1863685986368624
Deletion  Chr1010886500108865001
Deletion  Chr81142100111467000460002
Deletion  Chr1214197642141976421
Deletion  Chr415365729153657291
Deletion  Chr9157486621574872968
Deletion  Chr315896428158964336
Deletion  Chr2160568241605683714
Deletion  Chr2162930011658200028900018
Deletion  Chr218859831188598311
Deletion  Chr1219091487190914882
Deletion  Chr323160721231607211
Deletion  Chr125512206255122061OsKitaake01g247533
Deletion  Chr526421694264216985OsKitaake05g233900
Deletion  Chr729004243290042431
Deletion  Chr829252725292527317OsKitaake08g254900
Deletion  Chr431970543319705442
Deletion  Chr132704906327049061
Deletion  Chr1407071944070724148

Insertions: 4

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr436157070361570721
Insertion  Chr712758110127581132
Insertion  Chr721553253215532562
Insertion  Chr8880221388022162OsKitaake08g080800 image

Inversions: 3

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion  Chr31315307713166556
Inversion  Chr31315308013166563
Inversion  Chr11505982215059941

Translocations: 2

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation  Chr520252534Chr136469017OsKitaake01g387500
Translocation  Chr520253203Chr136469018OsKitaake01g387500