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| Mutant Information |
|---|
| Mutant Name | FN4495-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4495-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 35
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 38364743 | G-A | HET | ||
| SBS | Chr1 | 42150121 | G-T | HET | ||
| SBS | Chr2 | 10410118 | C-A | HET | ||
| SBS | Chr2 | 20233850 | A-G | HET | ||
| SBS | Chr2 | 20589326 | A-T | HET | ||
| SBS | Chr2 | 28229853 | T-A | HOMO | ||
| SBS | Chr2 | 28725536 | C-T | HET | ||
| SBS | Chr2 | 33036331 | G-A | HET | ||
| SBS | Chr3 | 19689141 | A-T | HET | ||
| SBS | Chr4 | 8321206 | A-G | HET | ||
| SBS | Chr4 | 32286281 | A-T | HOMO | ||
| SBS | Chr4 | 32971976 | T-C | HOMO | ||
| SBS | Chr5 | 1148432 | G-A | HET | OsKitaake05g014500 | |
| SBS | Chr5 | 15996868 | A-C | HET | ||
| SBS | Chr5 | 25212673 | G-C | HET | ||
| SBS | Chr6 | 15604511 | G-A | HET | ||
| SBS | Chr6 | 22173465 | T-C | HET | ||
| SBS | Chr7 | 4403281 | A-G | HOMO | ||
| SBS | Chr7 | 23226267 | C-T | HET | ||
| SBS | Chr8 | 11631688 | C-T | HET | ||
| SBS | Chr8 | 20215525 | T-A | HOMO | ||
| SBS | Chr8 | 20215526 | T-A | HOMO | ||
| SBS | Chr8 | 25820043 | T-C | HET | ||
| SBS | Chr9 | 2190508 | C-G | HET | ||
| SBS | Chr9 | 2850660 | G-T | HET | ||
| SBS | Chr9 | 7890364 | C-T | HET | ||
| SBS | Chr9 | 13458013 | G-C | HOMO | ||
| SBS | Chr10 | 4105398 | G-A | HET | ||
| SBS | Chr10 | 7487050 | T-C | HET | ||
| SBS | Chr10 | 9825959 | C-T | HET | ||
| SBS | Chr11 | 11050016 | G-T | HET | ||
| SBS | Chr11 | 20296607 | T-A | HOMO | ||
| SBS | Chr11 | 20659500 | A-T | HOMO | ||
| SBS | Chr11 | 27667808 | A-G | HET | ||
| SBS | Chr12 | 20426523 | A-T | HET | OsKitaake12g159700 |
Deletions: 20
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 1771042 | 1771042 | 1 | |
| Deletion | Chr6 | 3155769 | 3155781 | 13 | |
| Deletion | Chr9 | 3553324 | 3553404 | 81 | |
| Deletion | Chr5 | 6641056 | 6641066 | 11 | |
| Deletion | Chr8 | 7035424 | 7035429 | 6 | |
| Deletion | Chr7 | 8181986 | 8181986 | 1 | |
| Deletion | Chr6 | 8628236 | 8628237 | 2 | |
| Deletion | Chr11 | 8649901 | 8649917 | 17 | |
| Deletion | Chr6 | 8931031 | 8931032 | 2 | |
| Deletion | Chr12 | 10328172 | 10328259 | 88 | |
| Deletion | Chr5 | 15081119 | 15081120 | 2 | |
| Deletion | Chr12 | 16698203 | 16698221 | 19 | |
| Deletion | Chr1 | 18822679 | 18822679 | 1 | OsKitaake01g189100 |
| Deletion | Chr8 | 21449008 | 21449008 | 1 | |
| Deletion | Chr12 | 23029203 | 23029203 | 1 | 2 |
| Deletion | Chr5 | 23164712 | 23164716 | 5 | |
| Deletion | Chr11 | 23787367 | 23787367 | 1 | |
| Deletion | Chr6 | 26948263 | 26948278 | 16 | |
| Deletion | Chr2 | 28446900 | 28446900 | 1 | |
| Deletion | Chr2 | 37130714 | 37130714 | 1 | OsKitaake02g398800 |
Insertions: 10
Inversions: 5
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr12 | 17525679 | Chr1 | 4175933 | |
| Translocation | Chr12 | 17526808 | Chr1 | 4175937 |