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Mutant Information 

Mutant NameFN4502-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4502-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 55

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr16926570A-THET
SBS  Chr114813001G-AHOMO
SBS  Chr115611719C-THET
SBS  Chr120911694G-THET
SBS  Chr127322128A-THET
SBS  Chr129213856C-AHET
SBS  Chr140337150A-GHET
SBS  Chr216161213C-AHET
SBS  Chr225589190C-AHOMO
SBS  Chr227022244T-GHOMO
SBS  Chr228907785T-CHETOsKitaake02g290600
SBS  Chr231929457C-THET
SBS  Chr233042219C-THET
SBS  Chr316545324C-AHET
SBS  Chr316862470A-GHET
SBS  Chr319535358T-CHET
SBS  Chr332833044A-THET
SBS  Chr334930440C-THET
SBS  Chr47296281C-THET
SBS  Chr49798493A-GHET
SBS  Chr414999794C-THET
SBS  Chr414999795G-THET
SBS  Chr415376316C-AHET
SBS  Chr417172413T-CHET
SBS  Chr418139445G-THET
SBS  Chr419765833G-CHET
SBS  Chr422470273T-AHET
SBS  Chr424852057G-THOMO
SBS  Chr55258889G-CHET
SBS  Chr510724619G-AHET
SBS  Chr522588775C-THOMO
SBS  Chr522926200C-THOMO
SBS  Chr526475211G-AHOMO
SBS  Chr528342075C-AHOMO
SBS  Chr610474604G-CHET
SBS  Chr618681155C-THET
SBS  Chr621759263C-THET
SBS  Chr627120320A-THOMO
SBS  Chr77410966C-THET
SBS  Chr727355627G-AHET
SBS  Chr82882552C-GHOMO
SBS  Chr817922775T-AHET
SBS  Chr95020697C-THOMO
SBS  Chr95690989C-AHOMO
SBS  Chr98236107G-AHET
SBS  Chr102121355A-GHET
SBS  Chr105057124C-THET
SBS  Chr1017751214A-GHET
SBS  Chr1019154190C-THET
SBS  Chr1023550287G-AHET
SBS  Chr114505071A-GHET
SBS  Chr1120145601G-THET
SBS  Chr1124658447G-THET
SBS  Chr121429725G-AHET
SBS  Chr1212467304G-AHET

Deletions: 15

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr12805212805211
Deletion  Chr3185056118505688
Deletion  Chr3559991455999141
Deletion  Chr8923713492371341
Deletion  Chr311409038114090403
Deletion  Chr214747241147472422
Deletion  Chr317126929171269291
Deletion  Chr919222834192228396
Deletion  Chr322400329224003324OsKitaake03g243700
Deletion  Chr822467590224675912
Deletion  Chr523807720238077201
Deletion  Chr625802971258029711
Deletion  Chr726532062265320709
Deletion  Chr628348674283486829
Deletion  Chr333555167335551671

Insertions: 10

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr515357971153579731
Insertion  Chr517352543173525451
Insertion  Chr5192378261923790376
Insertion  Chr8288045428804572
Insertion  Chr9848799684879981
Insertion  Chr9178183591781837717
Insertion  Chr323107369231073711
Insertion  Chr425595219255952211
Insertion  Chr821521242215212463
Insertion  Chr12405229340522962

Inversions: 4

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion  Chr620611392061366
Inversion  Chr101370644213706595
Inversion  Chr42182772021827940OsKitaake04g125301
Inversion  Chr12804127428041567

Translocations: 2

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation  Chr810904049Chr63986463
Translocation  Chr810904055Chr63986818