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Mutant Information 

Mutant NameFN4514-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4514-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 35

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr119205870A-CHET
SBS  Chr127852941C-THOMO
SBS  Chr136818665C-THET
SBS  Chr29086978G-THET
SBS  Chr217668772G-AHET
SBS  Chr236278495T-CHET
SBS  Chr39537381T-AHET
SBS  Chr310186532T-GHOMO
SBS  Chr310186538A-THOMO
SBS  Chr317965735C-AHOMO
SBS  Chr320775430T-AHOMO
SBS  Chr321621060G-AHET
SBS  Chr329668141C-THOMO
SBS  Chr46145521G-AHOMO
SBS  Chr418333513G-AHET
SBS  Chr513443302C-THOMO
SBS  Chr517757149A-GHOMO
SBS  Chr517915120A-GHET
SBS  Chr527756876C-AHETOsKitaake05g254100
SBS  Chr610012833C-THET
SBS  Chr624411373G-THOMO
SBS  Chr624411374A-THOMO
SBS  Chr72301973A-THET
SBS  Chr719967171A-THET
SBS  Chr727379212G-THETOsKitaake07g254600
SBS  Chr82679299T-CHET
SBS  Chr815245337C-THET
SBS  Chr825251958C-GHET
SBS  Chr97464323T-CHET
SBS  Chr1018136165C-GHET
SBS  Chr114818323C-GHET
SBS  Chr1127782802T-CHET
SBS  Chr1128493150T-CHET
SBS  Chr1215014075A-CHET
SBS  Chr1215477179C-THET

Deletions: 11

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr8533983553398351OsKitaake08g058100
Deletion  Chr3545301354530164OsKitaake03g077200
Deletion  Chr615582055155820617
Deletion  Chr617845795178457984
Deletion  Chr323002586230025861
Deletion  Chr123310843233108442
Deletion  Chr623830383238303875
Deletion  Chr626997658269976581
Deletion  Chr6285421702854217910
Deletion  Chr228699224286992252
Deletion  Chr436722001368110008900013

Insertions: 6

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr112583784125837861
Insertion  Chr3665826366582651
Insertion  Chr52671472726714856128
Insertion  Chr226841621268416231
Insertion  Chr325860864258608661
Insertion  Chr718982972189829741

Inversions: 8

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion  Chr1120015882398577OsKitaake11g028800
Inversion  Chr1120016172398592OsKitaake11g028800
Inversion  Chr1230818103236982
Inversion  Chr1230818143236998
Inversion  Chr981543538154560
Inversion  Chr41229615312296439OsKitaake04g059700
Inversion  Chr101470907814888706
Inversion  Chr101470908614888708

Translocations: 2

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation  Chr215400812Chr122605534
Translocation  Chr215528336Chr122605534