Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN4515-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4515-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 34
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 22654336 | A-G | HOMO | ||
| SBS | Chr1 | 29495321 | G-A | HOMO | OsKitaake01g289000 | |
| SBS | Chr1 | 42902399 | G-A | HOMO | ||
| SBS | Chr2 | 8204210 | T-A | HET | ||
| SBS | Chr2 | 25692086 | A-G | HET | ||
| SBS | Chr2 | 29778747 | A-C | HET | ||
| SBS | Chr2 | 30615811 | A-T | HET | ||
| SBS | Chr3 | 977547 | A-G | HET | ||
| SBS | Chr3 | 2071335 | T-C | HET | ||
| SBS | Chr3 | 6610086 | C-A | HET | ||
| SBS | Chr3 | 6741387 | G-A | HET | ||
| SBS | Chr4 | 5595084 | T-A | HET | ||
| SBS | Chr4 | 5900943 | C-T | HET | OsKitaake04g029500 | |
| SBS | Chr4 | 10816313 | G-C | HET | ||
| SBS | Chr4 | 24278657 | C-T | HET | ||
| SBS | Chr5 | 12174233 | A-G | HET | ||
| SBS | Chr6 | 12075201 | C-T | HET | ||
| SBS | Chr6 | 17600797 | G-A | HET | ||
| SBS | Chr7 | 6414457 | A-T | HET | ||
| SBS | Chr8 | 2853981 | G-A | HOMO | ||
| SBS | Chr8 | 13836562 | C-T | HOMO | ||
| SBS | Chr8 | 23810072 | G-A | HOMO | ||
| SBS | Chr8 | 25191329 | G-A | HET | ||
| SBS | Chr9 | 8089028 | T-C | HET | ||
| SBS | Chr10 | 15760891 | G-A | HET | ||
| SBS | Chr10 | 17557336 | T-C | HET | ||
| SBS | Chr11 | 3277992 | C-A | HET | ||
| SBS | Chr11 | 5930359 | C-T | HOMO | ||
| SBS | Chr11 | 14547641 | C-G | HOMO | ||
| SBS | Chr11 | 27567979 | A-G | HET | ||
| SBS | Chr12 | 5119013 | C-T | HET | ||
| SBS | Chr12 | 8645779 | G-C | HET | ||
| SBS | Chr12 | 11935838 | C-A | HET | ||
| SBS | Chr12 | 16600982 | C-A | HOMO |
Deletions: 19
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr3 | 707770 | 707777 | 8 | |
| Deletion | Chr8 | 1223516 | 1223528 | 13 | |
| Deletion | Chr5 | 4150413 | 4150424 | 12 | OsKitaake05g049800 |
| Deletion | Chr6 | 4853105 | 4853110 | 6 | |
| Deletion | Chr10 | 7443207 | 7443208 | 2 | |
| Deletion | Chr9 | 7716502 | 7716502 | 1 | |
| Deletion | Chr1 | 10480695 | 10480704 | 10 | |
| Deletion | Chr3 | 10629595 | 10629596 | 2 | |
| Deletion | Chr8 | 14997217 | 14997217 | 1 | |
| Deletion | Chr8 | 15046287 | 15046299 | 13 | |
| Deletion | Chr5 | 17529001 | 17535000 | 6000 | |
| Deletion | Chr5 | 21540616 | 21540616 | 1 | |
| Deletion | Chr11 | 22518114 | 22518130 | 17 | |
| Deletion | Chr6 | 24840702 | 24840702 | 1 | |
| Deletion | Chr8 | 27373937 | 27373938 | 2 | |
| Deletion | Chr11 | 28668465 | 28668478 | 14 | |
| Deletion | Chr5 | 30226513 | 30226513 | 1 | |
| Deletion | Chr1 | 31274724 | 31274725 | 2 | |
| Deletion | Chr1 | 38093032 | 38093056 | 25 |
Insertions: 9
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr3 | 17700833 | 17700835 | 1 |  |
| Insertion | Chr3 | 23912586 | 23912588 | 1 | |
| Insertion | Chr10 | 13528086 | 13528090 | 3 | |
| Insertion | Chr10 | 17312745 | 17312806 | 60 | |
| Insertion | Chr2 | 22927259 | 22927263 | 3 | |
| Insertion | Chr3 | 553676 | 553678 | 1 | |
| Insertion | Chr4 | 28778290 | 28778292 | 1 | |
| Insertion | Chr5 | 14169235 | 14169237 | 1 | |
| Insertion | Chr8 | 26451057 | 26451062 | 4 | OsKitaake08g212100 |
Inversions: 6
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr9 | 800365 | 800503 | |
| Inversion | Chr8 | 1682016 | 1682151 | |
| Inversion | Chr4 | 2295879 | 2296191 | |
| Inversion | Chr10 | 9824543 | 9844499 | OsKitaake10g057400 |
| Inversion | Chr10 | 9824630 | 9844516 | OsKitaake10g057400 |
| Inversion | Chr12 | 20421207 | 20421361 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr5 | 17528580 | Chr1 | 31099707 | |
| Translocation | Chr5 | 17535512 | Chr1 | 31099420 | OsKitaake01g310200 |