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Mutant Information |
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Mutant Name | FN4517-S [Download] |
Generation | M2 |
Genus Species | Oryza Sativa |
Cultivar | Kitaake |
Alignment File (BAM File) | Download FN4517-S Alignment File |
Seed Availability | Yes [Order Seeds] |
Variant Information |
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Single base substitutions: 26
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
SBS | Chr2 | 16386822 | T-C | HET | ||
SBS | Chr2 | 20287734 | G-T | HOMO | ||
SBS | Chr2 | 30351602 | C-T | HET | ||
SBS | Chr2 | 31230975 | C-T | HOMO | ||
SBS | Chr3 | 3019856 | G-A | HET | ||
SBS | Chr3 | 26939765 | G-C | HET | ||
SBS | Chr4 | 7037242 | G-A | HET | ||
SBS | Chr4 | 10207713 | T-C | HOMO | ||
SBS | Chr4 | 10824343 | C-T | HET | ||
SBS | Chr4 | 17129658 | C-T | HET | ||
SBS | Chr5 | 21398114 | C-T | HET | ||
SBS | Chr5 | 24943321 | G-A | HOMO | ||
SBS | Chr6 | 1199209 | G-A | HET | ||
SBS | Chr6 | 29854161 | G-T | HET | ||
SBS | Chr7 | 1687793 | G-A | HET | ||
SBS | Chr8 | 3016664 | C-A | HET | ||
SBS | Chr8 | 16750641 | G-A | HET | ||
SBS | Chr8 | 19365789 | C-T | HET | ||
SBS | Chr8 | 22208397 | C-T | HET | ||
SBS | Chr8 | 26152286 | C-T | HOMO | ||
SBS | Chr9 | 14659762 | C-A | HOMO | ||
SBS | Chr9 | 18755972 | G-A | HET | ||
SBS | Chr10 | 18261418 | G-T | HET | ||
SBS | Chr12 | 1300729 | C-T | HOMO | ||
SBS | Chr12 | 3872603 | G-T | HET | ||
SBS | Chr12 | 24625406 | C-A | HET | OsKitaake12g199800 |
Deletions: 15
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
Deletion | Chr6 | 686594 | 686601 | 8 | OsKitaake06g006700 |
Deletion | Chr12 | 882453 | 882458 | 6 | |
Deletion | Chr11 | 1168586 | 1168588 | 3 | |
Deletion | Chr12 | 8727080 | 8727127 | 48 | |
Deletion | Chr8 | 12274723 | 12274723 | 1 | |
Deletion | Chr8 | 12395474 | 12395474 | 1 | |
Deletion | Chr9 | 13243737 | 13243737 | 1 | |
Deletion | Chr5 | 15424850 | 15424850 | 1 | |
Deletion | Chr9 | 15574635 | 15574635 | 1 | |
Deletion | Chr1 | 16074965 | 16074965 | 1 | |
Deletion | Chr2 | 21174064 | 21174065 | 2 | |
Deletion | Chr11 | 24275858 | 24275858 | 1 | |
Deletion | Chr8 | 28779583 | 28779584 | 2 | |
Deletion | Chr6 | 30371866 | 30371925 | 60 | |
Deletion | Chr4 | 36909174 | 36909174 | 1 | 2 |
Insertions: 5