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Mutant Information 

Mutant NameFN4517-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4517-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 26

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr216386822T-CHET
SBS  Chr220287734G-THOMO
SBS  Chr230351602C-THET
SBS  Chr231230975C-THOMO
SBS  Chr33019856G-AHET
SBS  Chr326939765G-CHET
SBS  Chr47037242G-AHET
SBS  Chr410207713T-CHOMO
SBS  Chr410824343C-THET
SBS  Chr417129658C-THET
SBS  Chr521398114C-THET
SBS  Chr524943321G-AHOMO
SBS  Chr61199209G-AHET
SBS  Chr629854161G-THET
SBS  Chr71687793G-AHET
SBS  Chr83016664C-AHET
SBS  Chr816750641G-AHET
SBS  Chr819365789C-THET
SBS  Chr822208397C-THET
SBS  Chr826152286C-THOMO
SBS  Chr914659762C-AHOMO
SBS  Chr918755972G-AHET
SBS  Chr1018261418G-THET
SBS  Chr121300729C-THOMO
SBS  Chr123872603G-THET
SBS  Chr1224625406C-AHETOsKitaake12g199800

Deletions: 15

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr66865946866018OsKitaake06g006700
Deletion  Chr128824538824586
Deletion  Chr11116858611685883
Deletion  Chr128727080872712748
Deletion  Chr812274723122747231
Deletion  Chr812395474123954741
Deletion  Chr913243737132437371
Deletion  Chr515424850154248501
Deletion  Chr915574635155746351
Deletion  Chr116074965160749651
Deletion  Chr221174064211740652
Deletion  Chr1124275858242758581
Deletion  Chr828779583287795842
Deletion  Chr6303718663037192560
Deletion  Chr4369091743690917412

Insertions: 5

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr315672115156721171
Insertion  Chr317726809177268111
Insertion  Chr312159231121592331
Insertion  Chr826264719262647211
Insertion  Chr1211720767117207691