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| Mutant Information |
|---|
| Mutant Name | FN4545-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4545-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 33
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 310945 | T-A | HET | ||
| SBS | Chr1 | 310946 | C-A | HET | ||
| SBS | Chr1 | 6658786 | C-A | HET | ||
| SBS | Chr1 | 22584895 | G-A | HET | ||
| SBS | Chr1 | 38732238 | T-A | HOMO | ||
| SBS | Chr2 | 10183332 | G-T | HET | ||
| SBS | Chr2 | 11089632 | C-T | HOMO | ||
| SBS | Chr2 | 12847032 | C-T | HET | ||
| SBS | Chr2 | 16105345 | A-G | HET | ||
| SBS | Chr2 | 26574135 | C-T | HOMO | ||
| SBS | Chr2 | 26947061 | C-T | HET | ||
| SBS | Chr3 | 11919424 | C-A | HET | ||
| SBS | Chr3 | 14938256 | C-A | HET | ||
| SBS | Chr4 | 27076027 | G-T | HOMO | ||
| SBS | Chr4 | 28104664 | G-A | HOMO | ||
| SBS | Chr4 | 28450588 | G-T | HET | ||
| SBS | Chr5 | 17479592 | G-A | HOMO | ||
| SBS | Chr5 | 24231975 | A-G | HOMO | ||
| SBS | Chr6 | 760130 | A-T | HET | OsKitaake06g007600 | |
| SBS | Chr6 | 5017310 | G-T | HET | ||
| SBS | Chr6 | 18039919 | C-A | HET | ||
| SBS | Chr6 | 18616363 | T-C | HOMO | ||
| SBS | Chr7 | 2860432 | C-A | HET | ||
| SBS | Chr8 | 3739665 | A-T | HET | ||
| SBS | Chr8 | 7162127 | C-T | HET | ||
| SBS | Chr8 | 15581939 | T-A | HET | ||
| SBS | Chr10 | 176354 | T-G | HET | ||
| SBS | Chr10 | 1958726 | G-A | HET | ||
| SBS | Chr10 | 8356930 | A-C | HET | ||
| SBS | Chr10 | 11513459 | C-T | HET | ||
| SBS | Chr11 | 25173400 | G-C | HOMO | ||
| SBS | Chr11 | 25173401 | G-A | HOMO | ||
| SBS | Chr12 | 21432813 | A-T | HET |
Deletions: 23
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr1 | 2357928 | 2357928 | 1 | |
| Deletion | Chr10 | 8411637 | 8411637 | 1 | |
| Deletion | Chr11 | 8808105 | 8808105 | 1 | |
| Deletion | Chr2 | 9590243 | 9590251 | 9 | |
| Deletion | Chr1 | 11131060 | 11131060 | 1 | OsKitaake01g136700 |
| Deletion | Chr5 | 12166142 | 12166143 | 2 | |
| Deletion | Chr5 | 13089434 | 13089434 | 1 | |
| Deletion | Chr2 | 14359020 | 14359020 | 1 | |
| Deletion | Chr10 | 14440429 | 14440430 | 2 | |
| Deletion | Chr10 | 14678440 | 14678442 | 3 | |
| Deletion | Chr12 | 15906001 | 15948000 | 42000 | |
| Deletion | Chr12 | 15953001 | 16285000 | 332000 | 19 |
| Deletion | Chr6 | 16125112 | 16125115 | 4 | |
| Deletion | Chr12 | 16344001 | 16416000 | 72000 | 3 |
| Deletion | Chr12 | 17983411 | 17983412 | 2 | |
| Deletion | Chr1 | 19040663 | 19040671 | 9 | |
| Deletion | Chr7 | 21934825 | 21934825 | 1 | |
| Deletion | Chr11 | 23173815 | 23173816 | 2 | |
| Deletion | Chr2 | 23921052 | 23921054 | 3 | |
| Deletion | Chr11 | 25169799 | 25169811 | 13 | |
| Deletion | Chr2 | 26930602 | 26930616 | 15 | OsKitaake02g268800 |
| Deletion | Chr5 | 29646909 | 29646915 | 7 | |
| Deletion | Chr4 | 30561649 | 30561650 | 2 |
Insertions: 7
Inversions: 4
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr5 | 2813811 | 2814020 | |
| Inversion | Chr7 | 11166868 | 11167009 | |
| Inversion | Chr2 | 27863960 | 27864125 | |
| Inversion | Chr1 | 41784115 | 41784269 | OsKitaake01g457000 |